Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC83Q8IWF9 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC83Q8IWF9 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC83Q8IWF9 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC83Q8IWF9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC83Q8IWF9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC83Q8IWF9 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.09■□□□□ 0.97
CCDC83Q8IWF9 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC83Q8IWF9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC83Q8IWF9 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC83Q8IWF9 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC83Q8IWF9 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC83Q8IWF9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC83Q8IWF9 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC83Q8IWF9 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC83Q8IWF9 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC83Q8IWF9 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC83Q8IWF9 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC83Q8IWF9 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC83Q8IWF9 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC83Q8IWF9 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC83Q8IWF9 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC83Q8IWF9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC83Q8IWF9 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC21.08■□□□□ 0.97
CCDC83Q8IWF9 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC83Q8IWF9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC83Q8IWF9 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CCDC83Q8IWF9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CCDC83Q8IWF9 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC83Q8IWF9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CCDC83Q8IWF9 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC83Q8IWF9 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC83Q8IWF9 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CCDC83Q8IWF9 RASA4DP-201ENST00000460726 1199 ntBASIC21.08■□□□□ 0.97
CCDC83Q8IWF9 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CCDC83Q8IWF9 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CCDC83Q8IWF9 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC83Q8IWF9 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.08■□□□□ 0.97
CCDC83Q8IWF9 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC83Q8IWF9 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.08■□□□□ 0.97
CCDC83Q8IWF9 AL441883.1-201ENST00000566170 1045 ntBASIC21.08■□□□□ 0.97
CCDC83Q8IWF9 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC83Q8IWF9 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC83Q8IWF9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC83Q8IWF9 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.08■□□□□ 0.96
CCDC83Q8IWF9 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC83Q8IWF9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
CCDC83Q8IWF9 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.08■□□□□ 0.96
CCDC83Q8IWF9 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC83Q8IWF9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.08■□□□□ 0.96
CCDC83Q8IWF9 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.08■□□□□ 0.96
CCDC83Q8IWF9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC83Q8IWF9 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC83Q8IWF9 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC83Q8IWF9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC83Q8IWF9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC83Q8IWF9 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC83Q8IWF9 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CCDC83Q8IWF9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC83Q8IWF9 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC83Q8IWF9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC21.07■□□□□ 0.96
CCDC83Q8IWF9 AC008687.5-201ENST00000593746 558 ntBASIC21.07■□□□□ 0.96
CCDC83Q8IWF9 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CCDC83Q8IWF9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC83Q8IWF9 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC83Q8IWF9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC83Q8IWF9 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC83Q8IWF9 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC83Q8IWF9 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CCDC83Q8IWF9 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC83Q8IWF9 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC83Q8IWF9 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
CCDC83Q8IWF9 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC83Q8IWF9 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC83Q8IWF9 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC83Q8IWF9 AC022898.2-201ENST00000616822 1312 ntBASIC21.06■□□□□ 0.96
CCDC83Q8IWF9 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC83Q8IWF9 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CCDC83Q8IWF9 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
CCDC83Q8IWF9 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC83Q8IWF9 AC080080.1-201ENST00000625121 2420 ntBASIC21.06■□□□□ 0.96
CCDC83Q8IWF9 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.06■□□□□ 0.96
CCDC83Q8IWF9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC83Q8IWF9 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CCDC83Q8IWF9 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC83Q8IWF9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC83Q8IWF9 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CCDC83Q8IWF9 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC83Q8IWF9 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.06■□□□□ 0.96
CCDC83Q8IWF9 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC21.06■□□□□ 0.96
CCDC83Q8IWF9 AC034232.1-201ENST00000506026 1064 ntBASIC21.06■□□□□ 0.96
CCDC83Q8IWF9 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC83Q8IWF9 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CCDC83Q8IWF9 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC83Q8IWF9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.06■□□□□ 0.96
CCDC83Q8IWF9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC83Q8IWF9 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC83Q8IWF9 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC83Q8IWF9 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC83Q8IWF9 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms