Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC17.62■□□□□ 0.41
Samm50Q8BGH2 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Grk6-207ENSMUST00000225925 2769 ntBASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Samm50Q8BGH2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Samm50Q8BGH2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17.6■□□□□ 0.41
Samm50Q8BGH2 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Samm50Q8BGH2 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Samm50Q8BGH2 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Samm50Q8BGH2 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Samm50Q8BGH2 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Samm50Q8BGH2 Mir5126-201ENSMUST00000175513 77 ntBASIC17.6■□□□□ 0.41
Samm50Q8BGH2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Samm50Q8BGH2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Samm50Q8BGH2 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Samm50Q8BGH2 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Samm50Q8BGH2 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Samm50Q8BGH2 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Samm50Q8BGH2 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Samm50Q8BGH2 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Samm50Q8BGH2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Samm50Q8BGH2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Samm50Q8BGH2 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Samm50Q8BGH2 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Samm50Q8BGH2 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.6■□□□□ 0.41
Samm50Q8BGH2 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Samm50Q8BGH2 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Samm50Q8BGH2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Samm50Q8BGH2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Samm50Q8BGH2 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Gm12350-201ENSMUST00000121208 462 ntBASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Gm27646-201ENSMUST00000183989 110 ntBASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Samm50Q8BGH2 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Gm43514-201ENSMUST00000198852 424 ntBASIC17.59■□□□□ 0.41
Samm50Q8BGH2 AV026068-213ENSMUST00000223675 1171 ntBASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Gm15590-201ENSMUST00000078419 552 ntBASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Samm50Q8BGH2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms