Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.34□□□□□ -0.43
Trav8d-1Q5R1H8 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8d-1Q5R1H8 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8d-1Q5R1H8 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8d-1Q5R1H8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8d-1Q5R1H8 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.34□□□□□ -0.43
Trav8d-1Q5R1H8 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav8d-1Q5R1H8 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8d-1Q5R1H8 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8d-1Q5R1H8 Gm17807-201ENSMUST00000186869 298 ntBASIC12.34□□□□□ -0.43
Trav8d-1Q5R1H8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Trav8d-1Q5R1H8 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.34□□□□□ -0.43
Trav8d-1Q5R1H8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8d-1Q5R1H8 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8d-1Q5R1H8 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav8d-1Q5R1H8 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav8d-1Q5R1H8 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8d-1Q5R1H8 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8d-1Q5R1H8 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8d-1Q5R1H8 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8d-1Q5R1H8 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8d-1Q5R1H8 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8d-1Q5R1H8 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8d-1Q5R1H8 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8d-1Q5R1H8 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.43
Trav8d-1Q5R1H8 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav8d-1Q5R1H8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.33□□□□□ -0.43
Trav8d-1Q5R1H8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav8d-1Q5R1H8 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav8d-1Q5R1H8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
Trav8d-1Q5R1H8 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav8d-1Q5R1H8 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Mir3081-201ENSMUST00000175305 84 ntBASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8d-1Q5R1H8 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Rprl3-201ENSMUST00000157400 290 ntBASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8d-1Q5R1H8 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms