Protein–RNA interactions for Protein: Q03468

ERCC6, DNA excision repair protein ERCC-6, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6Q03468 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC30.34■■■□□ 2.45
ERCC6Q03468 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC30.34■■■□□ 2.45
ERCC6Q03468 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
ERCC6Q03468 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC30.34■■■□□ 2.45
ERCC6Q03468 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
ERCC6Q03468 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
ERCC6Q03468 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
ERCC6Q03468 MYLKP1-201ENST00000509077 1580 ntBASIC30.33■■■□□ 2.45
ERCC6Q03468 AC141586.3-201ENST00000562166 1838 ntBASIC30.33■■■□□ 2.45
ERCC6Q03468 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
ERCC6Q03468 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
ERCC6Q03468 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
ERCC6Q03468 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC30.33■■■□□ 2.45
ERCC6Q03468 PPP6R2P1-201ENST00000450880 1275 ntBASIC30.33■■■□□ 2.45
ERCC6Q03468 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC30.33■■■□□ 2.45
ERCC6Q03468 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC30.33■■■□□ 2.45
ERCC6Q03468 AC026150.2-201ENST00000564693 1156 ntBASIC30.33■■■□□ 2.45
ERCC6Q03468 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC30.33■■■□□ 2.45
ERCC6Q03468 ACTL9-202ENST00000612068 1252 ntBASIC30.33■■■□□ 2.45
ERCC6Q03468 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
ERCC6Q03468 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
ERCC6Q03468 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
ERCC6Q03468 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
ERCC6Q03468 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
ERCC6Q03468 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
ERCC6Q03468 FUT8-AS1-201ENST00000621019 1521 ntBASIC30.32■■■□□ 2.44
ERCC6Q03468 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
ERCC6Q03468 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC30.32■■■□□ 2.44
ERCC6Q03468 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC30.32■■■□□ 2.44
ERCC6Q03468 AC004233.3-201ENST00000607794 1269 ntBASIC30.32■■■□□ 2.44
ERCC6Q03468 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
ERCC6Q03468 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
ERCC6Q03468 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
ERCC6Q03468 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
ERCC6Q03468 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
ERCC6Q03468 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC30.31■■■□□ 2.44
ERCC6Q03468 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
ERCC6Q03468 AC004945.1-201ENST00000416738 983 ntBASIC30.31■■■□□ 2.44
ERCC6Q03468 SPDYE7P-202ENST00000420373 878 ntBASIC30.31■■■□□ 2.44
ERCC6Q03468 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
ERCC6Q03468 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
ERCC6Q03468 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC30.31■■■□□ 2.44
ERCC6Q03468 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
ERCC6Q03468 AC092658.1-201ENST00000505836 891 ntBASIC30.31■■■□□ 2.44
ERCC6Q03468 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC30.31■■■□□ 2.44
ERCC6Q03468 AC243562.1-201ENST00000560672 389 ntBASIC30.31■■■□□ 2.44
ERCC6Q03468 Six3os1_5.1-201ENST00000611000 271 ntBASIC30.31■■■□□ 2.44
ERCC6Q03468 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC30.31■■■□□ 2.44
ERCC6Q03468 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC30.31■■■□□ 2.44
ERCC6Q03468 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC30.31■■■□□ 2.44
ERCC6Q03468 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
ERCC6Q03468 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
ERCC6Q03468 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC30.31■■■□□ 2.44
ERCC6Q03468 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC30.31■■■□□ 2.44
ERCC6Q03468 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC30.31■■■□□ 2.44
ERCC6Q03468 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC30.31■■■□□ 2.44
ERCC6Q03468 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
ERCC6Q03468 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC30.31■■■□□ 2.44
ERCC6Q03468 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
ERCC6Q03468 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC30.3■■■□□ 2.44
ERCC6Q03468 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC30.3■■■□□ 2.44
ERCC6Q03468 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
ERCC6Q03468 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC30.3■■■□□ 2.44
ERCC6Q03468 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
ERCC6Q03468 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC30.3■■■□□ 2.44
ERCC6Q03468 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
ERCC6Q03468 AC079776.1-201ENST00000401540 1152 ntBASIC30.3■■■□□ 2.44
ERCC6Q03468 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
ERCC6Q03468 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC30.3■■■□□ 2.44
ERCC6Q03468 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
ERCC6Q03468 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC30.3■■■□□ 2.44
ERCC6Q03468 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
ERCC6Q03468 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC30.29■■■□□ 2.44
ERCC6Q03468 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
ERCC6Q03468 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC30.29■■■□□ 2.44
ERCC6Q03468 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC30.29■■■□□ 2.44
ERCC6Q03468 ACA64.2-201ENST00000459014 129 ntBASIC30.29■■■□□ 2.44
ERCC6Q03468 GIMAP3P-201ENST00000495150 836 ntBASIC30.29■■■□□ 2.44
ERCC6Q03468 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
ERCC6Q03468 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
ERCC6Q03468 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
ERCC6Q03468 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
ERCC6Q03468 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC30.28■■■□□ 2.44
ERCC6Q03468 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC30.28■■■□□ 2.44
ERCC6Q03468 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC30.28■■■□□ 2.44
ERCC6Q03468 PTPA-220ENST00000436883 532 ntTSL 4 BASIC30.28■■■□□ 2.44
ERCC6Q03468 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
ERCC6Q03468 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC30.28■■■□□ 2.44
ERCC6Q03468 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC30.28■■■□□ 2.44
ERCC6Q03468 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
ERCC6Q03468 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC30.28■■■□□ 2.44
ERCC6Q03468 MIR4525-201ENST00000580000 75 ntBASIC30.28■■■□□ 2.44
ERCC6Q03468 MIR6080-201ENST00000617359 66 ntBASIC30.28■■■□□ 2.44
ERCC6Q03468 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC30.28■■■□□ 2.44
ERCC6Q03468 IGHV3-72-202ENST00000621503 303 ntBASIC30.28■■■□□ 2.44
ERCC6Q03468 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
ERCC6Q03468 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
ERCC6Q03468 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
ERCC6Q03468 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
ERCC6Q03468 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms