Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.43■□□□□ 0.22
CDC42P60953 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDC42P60953 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDC42P60953 AC009065.1-201ENST00000564055 1225 ntBASIC16.43■□□□□ 0.22
CDC42P60953 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.43■□□□□ 0.22
CDC42P60953 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CDC42P60953 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDC42P60953 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDC42P60953 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.43■□□□□ 0.22
CDC42P60953 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDC42P60953 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDC42P60953 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.43■□□□□ 0.22
CDC42P60953 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CDC42P60953 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.43■□□□□ 0.22
CDC42P60953 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.43■□□□□ 0.22
CDC42P60953 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CDC42P60953 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
CDC42P60953 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CDC42P60953 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDC42P60953 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CDC42P60953 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CDC42P60953 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.43■□□□□ 0.22
CDC42P60953 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDC42P60953 AC036111.1-201ENST00000533973 1582 ntBASIC16.43■□□□□ 0.22
CDC42P60953 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDC42P60953 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC42P60953 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CDC42P60953 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CDC42P60953 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC42P60953 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC42P60953 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.42■□□□□ 0.22
CDC42P60953 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC42P60953 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC42P60953 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC42P60953 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC42P60953 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC42P60953 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.42■□□□□ 0.22
CDC42P60953 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDC42P60953 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDC42P60953 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.42■□□□□ 0.22
CDC42P60953 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.42■□□□□ 0.22
CDC42P60953 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.42■□□□□ 0.22
CDC42P60953 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.42■□□□□ 0.22
CDC42P60953 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.42■□□□□ 0.22
CDC42P60953 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.42■□□□□ 0.22
CDC42P60953 MIR6786-201ENST00000616843 113 ntBASIC16.42■□□□□ 0.22
CDC42P60953 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC42P60953 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC42P60953 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC42P60953 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.42■□□□□ 0.22
CDC42P60953 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC42P60953 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.42■□□□□ 0.22
CDC42P60953 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.42■□□□□ 0.22
CDC42P60953 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC42P60953 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CDC42P60953 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC42P60953 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDC42P60953 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC42P60953 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDC42P60953 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDC42P60953 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
CDC42P60953 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDC42P60953 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.41■□□□□ 0.22
CDC42P60953 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDC42P60953 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDC42P60953 LINC01126-201ENST00000623515 1646 ntBASIC16.41■□□□□ 0.22
CDC42P60953 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDC42P60953 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDC42P60953 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.41■□□□□ 0.22
CDC42P60953 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDC42P60953 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CDC42P60953 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDC42P60953 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDC42P60953 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
CDC42P60953 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDC42P60953 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.41■□□□□ 0.22
CDC42P60953 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CDC42P60953 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
CDC42P60953 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.41■□□□□ 0.22
CDC42P60953 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDC42P60953 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDC42P60953 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
CDC42P60953 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDC42P60953 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDC42P60953 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.41■□□□□ 0.22
CDC42P60953 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CDC42P60953 AL118508.1-201ENST00000613502 2345 ntBASIC16.41■□□□□ 0.22
CDC42P60953 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDC42P60953 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CDC42P60953 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.41■□□□□ 0.22
CDC42P60953 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDC42P60953 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.41■□□□□ 0.22
CDC42P60953 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CDC42P60953 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.41■□□□□ 0.22
CDC42P60953 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.4■□□□□ 0.22
CDC42P60953 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.4■□□□□ 0.22
CDC42P60953 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC42P60953 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC42P60953 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDC42P60953 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms