Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LBX1P52954 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.1■□□□□ 0.81
LBX1P52954 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
LBX1P52954 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.1■□□□□ 0.81
LBX1P52954 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LBX1P52954 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LBX1P52954 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LBX1P52954 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LBX1P52954 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LBX1P52954 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LBX1P52954 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC20.1■□□□□ 0.81
LBX1P52954 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC20.1■□□□□ 0.81
LBX1P52954 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
LBX1P52954 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LBX1P52954 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.1■□□□□ 0.81
LBX1P52954 AC096633.1-201ENST00000422446 749 ntBASIC20.1■□□□□ 0.81
LBX1P52954 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
LBX1P52954 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LBX1P52954 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC20.1■□□□□ 0.81
LBX1P52954 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC20.1■□□□□ 0.81
LBX1P52954 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC20.1■□□□□ 0.81
LBX1P52954 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.1■□□□□ 0.81
LBX1P52954 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LBX1P52954 AC132938.5-201ENST00000624980 1813 ntBASIC20.1■□□□□ 0.81
LBX1P52954 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
LBX1P52954 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
LBX1P52954 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LBX1P52954 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LBX1P52954 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LBX1P52954 AIRN-201ENST00000601203 4374 ntBASIC20.09■□□□□ 0.81
LBX1P52954 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LBX1P52954 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LBX1P52954 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LBX1P52954 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LBX1P52954 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LBX1P52954 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.09■□□□□ 0.81
LBX1P52954 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.09■□□□□ 0.81
LBX1P52954 PPP6R2P1-201ENST00000450880 1275 ntBASIC20.09■□□□□ 0.81
LBX1P52954 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LBX1P52954 RN7SL589P-201ENST00000481268 310 ntBASIC20.09■□□□□ 0.81
LBX1P52954 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
LBX1P52954 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC20.09■□□□□ 0.81
LBX1P52954 CDK4-206ENST00000549606 558 ntTSL 2 BASIC20.09■□□□□ 0.81
LBX1P52954 TP53TG3HP-202ENST00000569755 579 ntBASIC20.09■□□□□ 0.81
LBX1P52954 TMEM261P1-201ENST00000604899 340 ntBASIC20.09■□□□□ 0.81
LBX1P52954 IGHV3-72-202ENST00000621503 303 ntBASIC20.09■□□□□ 0.81
LBX1P52954 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.09■□□□□ 0.81
LBX1P52954 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.09■□□□□ 0.81
LBX1P52954 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LBX1P52954 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.09■□□□□ 0.81
LBX1P52954 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.08■□□□□ 0.81
LBX1P52954 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.08■□□□□ 0.81
LBX1P52954 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.08■□□□□ 0.81
LBX1P52954 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.08■□□□□ 0.81
LBX1P52954 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LBX1P52954 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LBX1P52954 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LBX1P52954 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LBX1P52954 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LBX1P52954 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LBX1P52954 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
LBX1P52954 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LBX1P52954 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LBX1P52954 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LBX1P52954 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LBX1P52954 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
LBX1P52954 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
LBX1P52954 HCG4-201ENST00000418983 998 ntBASIC20.08■□□□□ 0.81
LBX1P52954 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LBX1P52954 SPTLC1P1-201ENST00000447199 261 ntBASIC20.08■□□□□ 0.81
LBX1P52954 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.08■□□□□ 0.81
LBX1P52954 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LBX1P52954 AC092552.1-201ENST00000547243 906 ntBASIC20.08■□□□□ 0.81
LBX1P52954 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LBX1P52954 AC073314.1-201ENST00000568729 2216 ntBASIC20.08■□□□□ 0.8
LBX1P52954 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.08■□□□□ 0.8
LBX1P52954 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LBX1P52954 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
LBX1P52954 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
LBX1P52954 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LBX1P52954 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LBX1P52954 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LBX1P52954 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.07■□□□□ 0.8
LBX1P52954 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LBX1P52954 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LBX1P52954 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LBX1P52954 MXI1-205ENST00000393134 889 ntTSL 2 BASIC20.07■□□□□ 0.8
LBX1P52954 SPDYE14P-201ENST00000442619 822 ntBASIC20.07■□□□□ 0.8
LBX1P52954 FAM185BP-201ENST00000443595 716 ntBASIC20.07■□□□□ 0.8
LBX1P52954 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC20.07■□□□□ 0.8
LBX1P52954 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC20.07■□□□□ 0.8
LBX1P52954 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
LBX1P52954 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC20.07■□□□□ 0.8
LBX1P52954 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.07■□□□□ 0.8
LBX1P52954 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LBX1P52954 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LBX1P52954 AL033527.4-201ENST00000641026 673 ntBASIC20.07■□□□□ 0.8
LBX1P52954 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LBX1P52954 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LBX1P52954 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms