Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox2P48432 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Sox2P48432 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox2P48432 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox2P48432 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox2P48432 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox2P48432 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sox2P48432 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox2P48432 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox2P48432 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.1□□□□□ -0.15
Sox2P48432 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox2P48432 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox2P48432 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox2P48432 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox2P48432 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox2P48432 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox2P48432 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sox2P48432 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Sox2P48432 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox2P48432 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox2P48432 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.1□□□□□ -0.15
Sox2P48432 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.1□□□□□ -0.15
Sox2P48432 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox2P48432 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox2P48432 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox2P48432 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.09□□□□□ -0.15
Sox2P48432 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox2P48432 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox2P48432 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox2P48432 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox2P48432 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox2P48432 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Sox2P48432 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox2P48432 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox2P48432 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox2P48432 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox2P48432 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.09□□□□□ -0.15
Sox2P48432 Mir3081-201ENSMUST00000175305 84 ntBASIC14.09□□□□□ -0.15
Sox2P48432 Gm29518-201ENSMUST00000190858 372 ntBASIC14.09□□□□□ -0.15
Sox2P48432 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.09□□□□□ -0.15
Sox2P48432 Gm44454-201ENSMUST00000198541 138 ntBASIC14.09□□□□□ -0.15
Sox2P48432 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.09□□□□□ -0.15
Sox2P48432 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox2P48432 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Sox2P48432 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox2P48432 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.09□□□□□ -0.15
Sox2P48432 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox2P48432 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox2P48432 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox2P48432 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.09□□□□□ -0.15
Sox2P48432 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox2P48432 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox2P48432 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Sox2P48432 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox2P48432 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sox2P48432 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.08□□□□□ -0.15
Sox2P48432 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sox2P48432 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sox2P48432 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.15
Sox2P48432 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox2P48432 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox2P48432 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox2P48432 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox2P48432 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox2P48432 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox2P48432 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox2P48432 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox2P48432 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.08□□□□□ -0.16
Sox2P48432 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.08□□□□□ -0.16
Sox2P48432 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox2P48432 Rprl3-201ENSMUST00000157400 290 ntBASIC14.08□□□□□ -0.16
Sox2P48432 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Sox2P48432 Gm18622-201ENSMUST00000219361 595 ntBASIC14.08□□□□□ -0.16
Sox2P48432 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.08□□□□□ -0.16
Sox2P48432 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Sox2P48432 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox2P48432 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.08□□□□□ -0.16
Sox2P48432 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Sox2P48432 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox2P48432 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox2P48432 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox2P48432 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox2P48432 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Sox2P48432 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox2P48432 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox2P48432 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox2P48432 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox2P48432 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox2P48432 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox2P48432 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox2P48432 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox2P48432 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox2P48432 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox2P48432 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Sox2P48432 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox2P48432 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox2P48432 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox2P48432 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox2P48432 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Sox2P48432 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms