Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.88□□□□□ -0.19
Thbs1P35441 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Thbs1P35441 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.88□□□□□ -0.19
Thbs1P35441 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Thbs1P35441 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Thbs1P35441 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Thbs1P35441 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Thbs1P35441 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thbs1P35441 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thbs1P35441 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thbs1P35441 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Thbs1P35441 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thbs1P35441 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thbs1P35441 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thbs1P35441 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thbs1P35441 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thbs1P35441 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thbs1P35441 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thbs1P35441 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.87□□□□□ -0.19
Thbs1P35441 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Thbs1P35441 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thbs1P35441 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Thbs1P35441 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Thbs1P35441 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.87□□□□□ -0.19
Thbs1P35441 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.87□□□□□ -0.19
Thbs1P35441 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Thbs1P35441 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.87□□□□□ -0.19
Thbs1P35441 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
Thbs1P35441 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thbs1P35441 AV026068-213ENSMUST00000223675 1171 ntBASIC13.87□□□□□ -0.19
Thbs1P35441 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thbs1P35441 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Thbs1P35441 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Thbs1P35441 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thbs1P35441 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thbs1P35441 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Thbs1P35441 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Thbs1P35441 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thbs1P35441 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Thbs1P35441 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Thbs1P35441 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thbs1P35441 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thbs1P35441 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thbs1P35441 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Thbs1P35441 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thbs1P35441 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Thbs1P35441 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Thbs1P35441 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Thbs1P35441 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.86□□□□□ -0.19
Thbs1P35441 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Thbs1P35441 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.86□□□□□ -0.19
Thbs1P35441 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Thbs1P35441 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thbs1P35441 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thbs1P35441 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Thbs1P35441 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thbs1P35441 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.86□□□□□ -0.19
Thbs1P35441 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Thbs1P35441 Gm10060-201ENSMUST00000212002 111 ntBASIC13.86□□□□□ -0.19
Thbs1P35441 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thbs1P35441 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Thbs1P35441 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thbs1P35441 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Thbs1P35441 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thbs1P35441 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Thbs1P35441 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thbs1P35441 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Thbs1P35441 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thbs1P35441 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Thbs1P35441 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Thbs1P35441 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Thbs1P35441 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Thbs1P35441 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thbs1P35441 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thbs1P35441 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Thbs1P35441 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Thbs1P35441 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Thbs1P35441 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thbs1P35441 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Thbs1P35441 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thbs1P35441 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thbs1P35441 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thbs1P35441 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.85□□□□□ -0.19
Thbs1P35441 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Thbs1P35441 Gm27525-201ENSMUST00000184465 107 ntBASIC13.85□□□□□ -0.19
Thbs1P35441 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.85□□□□□ -0.19
Thbs1P35441 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.85□□□□□ -0.19
Thbs1P35441 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.85□□□□□ -0.19
Thbs1P35441 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.85□□□□□ -0.19
Thbs1P35441 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thbs1P35441 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Thbs1P35441 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thbs1P35441 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thbs1P35441 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Thbs1P35441 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Thbs1P35441 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thbs1P35441 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thbs1P35441 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Thbs1P35441 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Thbs1P35441 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms