Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA3P29320 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
EPHA3P29320 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA3P29320 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA3P29320 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA3P29320 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA3P29320 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA3P29320 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA3P29320 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.47■□□□□ 0.39
EPHA3P29320 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA3P29320 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.47■□□□□ 0.39
EPHA3P29320 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.47■□□□□ 0.39
EPHA3P29320 AP003041.3-201ENST00000527151 707 ntBASIC17.47■□□□□ 0.39
EPHA3P29320 AC009065.1-201ENST00000564055 1225 ntBASIC17.47■□□□□ 0.39
EPHA3P29320 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.47■□□□□ 0.39
EPHA3P29320 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA3P29320 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA3P29320 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
EPHA3P29320 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA3P29320 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA3P29320 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.47■□□□□ 0.39
EPHA3P29320 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA3P29320 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
EPHA3P29320 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA3P29320 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA3P29320 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
EPHA3P29320 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA3P29320 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
EPHA3P29320 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA3P29320 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA3P29320 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.47■□□□□ 0.39
EPHA3P29320 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA3P29320 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA3P29320 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA3P29320 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EPHA3P29320 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
EPHA3P29320 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EPHA3P29320 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
EPHA3P29320 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.46■□□□□ 0.39
EPHA3P29320 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.46■□□□□ 0.39
EPHA3P29320 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
EPHA3P29320 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
EPHA3P29320 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
EPHA3P29320 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
EPHA3P29320 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EPHA3P29320 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EPHA3P29320 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.46■□□□□ 0.39
EPHA3P29320 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.46■□□□□ 0.39
EPHA3P29320 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.46■□□□□ 0.39
EPHA3P29320 AC104390.1-201ENST00000555663 520 ntBASIC17.46■□□□□ 0.39
EPHA3P29320 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
EPHA3P29320 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
EPHA3P29320 REXO1L10P-201ENST00000615707 1290 ntBASIC17.46■□□□□ 0.39
EPHA3P29320 REXO1L12P-201ENST00000622156 912 ntBASIC17.46■□□□□ 0.39
EPHA3P29320 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
EPHA3P29320 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
EPHA3P29320 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.46■□□□□ 0.39
EPHA3P29320 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.46■□□□□ 0.39
EPHA3P29320 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.46■□□□□ 0.39
EPHA3P29320 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
EPHA3P29320 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
EPHA3P29320 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.46■□□□□ 0.39
EPHA3P29320 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.46■□□□□ 0.39
EPHA3P29320 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
EPHA3P29320 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.46■□□□□ 0.38
EPHA3P29320 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
EPHA3P29320 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.46■□□□□ 0.38
EPHA3P29320 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
EPHA3P29320 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EPHA3P29320 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
EPHA3P29320 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.45■□□□□ 0.38
EPHA3P29320 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EPHA3P29320 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EPHA3P29320 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EPHA3P29320 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EPHA3P29320 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
EPHA3P29320 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.45■□□□□ 0.38
EPHA3P29320 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EPHA3P29320 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
EPHA3P29320 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EPHA3P29320 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
EPHA3P29320 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
EPHA3P29320 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EPHA3P29320 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
EPHA3P29320 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.45■□□□□ 0.38
EPHA3P29320 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.45■□□□□ 0.38
EPHA3P29320 WWOX-216ENST00000569818 525 ntBASIC17.45■□□□□ 0.38
EPHA3P29320 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.45■□□□□ 0.38
EPHA3P29320 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EPHA3P29320 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EPHA3P29320 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
EPHA3P29320 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
EPHA3P29320 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
EPHA3P29320 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.44■□□□□ 0.38
EPHA3P29320 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EPHA3P29320 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.44■□□□□ 0.38
EPHA3P29320 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EPHA3P29320 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
EPHA3P29320 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
EPHA3P29320 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms