Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
MMP3P08254 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.77■□□□□ 0.76
MMP3P08254 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
MMP3P08254 MIR1199-201ENST00000621445 119 ntBASIC19.77■□□□□ 0.76
MMP3P08254 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.77■□□□□ 0.76
MMP3P08254 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
MMP3P08254 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP3P08254 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP3P08254 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.77■□□□□ 0.76
MMP3P08254 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP3P08254 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
MMP3P08254 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
MMP3P08254 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
MMP3P08254 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
MMP3P08254 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP3P08254 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP3P08254 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
MMP3P08254 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP3P08254 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.76■□□□□ 0.75
MMP3P08254 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP3P08254 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP3P08254 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
MMP3P08254 AL049757.1-201ENST00000616842 1596 ntBASIC19.76■□□□□ 0.75
MMP3P08254 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
MMP3P08254 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP3P08254 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.76■□□□□ 0.75
MMP3P08254 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.76■□□□□ 0.75
MMP3P08254 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.76■□□□□ 0.75
MMP3P08254 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.76■□□□□ 0.75
MMP3P08254 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.76■□□□□ 0.75
MMP3P08254 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
MMP3P08254 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MMP3P08254 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.76■□□□□ 0.75
MMP3P08254 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
MMP3P08254 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP3P08254 AC120498.9-201ENST00000339021 3867 ntBASIC19.76■□□□□ 0.75
MMP3P08254 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP3P08254 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP3P08254 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.76■□□□□ 0.75
MMP3P08254 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.76■□□□□ 0.75
MMP3P08254 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MMP3P08254 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.76■□□□□ 0.75
MMP3P08254 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP3P08254 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP3P08254 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MMP3P08254 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.76■□□□□ 0.75
MMP3P08254 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
MMP3P08254 AC093677.2-201ENST00000600169 1863 ntBASIC19.75■□□□□ 0.75
MMP3P08254 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP3P08254 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MMP3P08254 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP3P08254 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP3P08254 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.75■□□□□ 0.75
MMP3P08254 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.75■□□□□ 0.75
MMP3P08254 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP3P08254 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
MMP3P08254 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP3P08254 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.75■□□□□ 0.75
MMP3P08254 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
MMP3P08254 AL020989.1-201ENST00000422979 469 ntBASIC19.75■□□□□ 0.75
MMP3P08254 AC005104.2-201ENST00000427818 678 ntBASIC19.75■□□□□ 0.75
MMP3P08254 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.75■□□□□ 0.75
MMP3P08254 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
MMP3P08254 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
MMP3P08254 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.75■□□□□ 0.75
MMP3P08254 AL139424.1-201ENST00000607572 797 ntBASIC19.75■□□□□ 0.75
MMP3P08254 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.75■□□□□ 0.75
MMP3P08254 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP3P08254 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
MMP3P08254 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP3P08254 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP3P08254 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP3P08254 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.75■□□□□ 0.75
MMP3P08254 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.75■□□□□ 0.75
MMP3P08254 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MMP3P08254 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
MMP3P08254 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.74■□□□□ 0.75
MMP3P08254 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MMP3P08254 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MMP3P08254 AC132938.5-201ENST00000624980 1813 ntBASIC19.74■□□□□ 0.75
MMP3P08254 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.74■□□□□ 0.75
MMP3P08254 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MMP3P08254 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MMP3P08254 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.74■□□□□ 0.75
MMP3P08254 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MMP3P08254 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.74■□□□□ 0.75
MMP3P08254 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.74■□□□□ 0.75
MMP3P08254 AC136632.2-201ENST00000512891 861 ntBASIC19.74■□□□□ 0.75
MMP3P08254 RNA5SP416-201ENST00000516838 111 ntBASIC19.74■□□□□ 0.75
MMP3P08254 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.74■□□□□ 0.75
MMP3P08254 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.74■□□□□ 0.75
MMP3P08254 AC040169.1-201ENST00000565382 521 ntBASIC19.74■□□□□ 0.75
MMP3P08254 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.74■□□□□ 0.75
MMP3P08254 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
MMP3P08254 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.74■□□□□ 0.75
MMP3P08254 AC010327.4-202ENST00000591484 748 ntBASIC19.74■□□□□ 0.75
MMP3P08254 AC005593.1-201ENST00000624894 515 ntBASIC19.74■□□□□ 0.75
MMP3P08254 PGM5P2-202ENST00000637225 1043 ntBASIC19.74■□□□□ 0.75
MMP3P08254 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.74■□□□□ 0.75
MMP3P08254 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms