Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
COL6A5A8TX70 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC13.79□□□□□ -0.2
COL6A5A8TX70 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COL6A5A8TX70 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.79□□□□□ -0.2
COL6A5A8TX70 KLF4P1-201ENST00000412782 1185 ntBASIC13.79□□□□□ -0.2
COL6A5A8TX70 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.79□□□□□ -0.2
COL6A5A8TX70 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.79□□□□□ -0.2
COL6A5A8TX70 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.79□□□□□ -0.2
COL6A5A8TX70 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.79□□□□□ -0.2
COL6A5A8TX70 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.79□□□□□ -0.2
COL6A5A8TX70 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COL6A5A8TX70 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
COL6A5A8TX70 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
COL6A5A8TX70 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13.79□□□□□ -0.2
COL6A5A8TX70 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.79□□□□□ -0.2
COL6A5A8TX70 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL6A5A8TX70 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL6A5A8TX70 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL6A5A8TX70 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL6A5A8TX70 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL6A5A8TX70 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL6A5A8TX70 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL6A5A8TX70 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
COL6A5A8TX70 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
COL6A5A8TX70 GIMAP3P-201ENST00000495150 836 ntBASIC13.79□□□□□ -0.2
COL6A5A8TX70 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.79□□□□□ -0.2
COL6A5A8TX70 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.79□□□□□ -0.2
COL6A5A8TX70 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.79□□□□□ -0.2
COL6A5A8TX70 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL6A5A8TX70 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.79□□□□□ -0.2
COL6A5A8TX70 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.79□□□□□ -0.2
COL6A5A8TX70 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
COL6A5A8TX70 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COL6A5A8TX70 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL6A5A8TX70 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC13.79□□□□□ -0.2
COL6A5A8TX70 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COL6A5A8TX70 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL6A5A8TX70 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC13.79□□□□□ -0.2
COL6A5A8TX70 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COL6A5A8TX70 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COL6A5A8TX70 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
COL6A5A8TX70 BCYRN1-201ENST00000418539 200 ntBASIC13.78□□□□□ -0.2
COL6A5A8TX70 AC092580.3-201ENST00000430932 139 ntBASIC13.78□□□□□ -0.2
COL6A5A8TX70 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL6A5A8TX70 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL6A5A8TX70 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC13.78□□□□□ -0.2
COL6A5A8TX70 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL6A5A8TX70 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC13.78□□□□□ -0.2
COL6A5A8TX70 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
COL6A5A8TX70 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL6A5A8TX70 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.78□□□□□ -0.2
COL6A5A8TX70 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.78□□□□□ -0.2
COL6A5A8TX70 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
COL6A5A8TX70 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL6A5A8TX70 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
COL6A5A8TX70 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.78□□□□□ -0.2
COL6A5A8TX70 FAM86C2P-203ENST00000528684 1004 ntBASIC13.78□□□□□ -0.2
COL6A5A8TX70 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COL6A5A8TX70 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.78□□□□□ -0.2
COL6A5A8TX70 LINC01225-203ENST00000563550 1244 ntBASIC13.78□□□□□ -0.2
COL6A5A8TX70 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.78□□□□□ -0.2
COL6A5A8TX70 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.78□□□□□ -0.2
COL6A5A8TX70 AC010460.3-201ENST00000511359 1579 ntBASIC13.78□□□□□ -0.2
COL6A5A8TX70 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.78□□□□□ -0.2
COL6A5A8TX70 LBX2-AS1-202ENST00000603175 2083 ntBASIC13.78□□□□□ -0.2
COL6A5A8TX70 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL6A5A8TX70 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC13.78□□□□□ -0.2
COL6A5A8TX70 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
COL6A5A8TX70 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
COL6A5A8TX70 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
COL6A5A8TX70 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
COL6A5A8TX70 AL512384.1-201ENST00000406683 331 ntBASIC13.77□□□□□ -0.2
COL6A5A8TX70 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.77□□□□□ -0.2
COL6A5A8TX70 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.77□□□□□ -0.2
COL6A5A8TX70 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.77□□□□□ -0.2
COL6A5A8TX70 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
COL6A5A8TX70 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
COL6A5A8TX70 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.77□□□□□ -0.2
COL6A5A8TX70 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.77□□□□□ -0.2
COL6A5A8TX70 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.77□□□□□ -0.2
COL6A5A8TX70 RAB43P1-201ENST00000561790 589 ntBASIC13.77□□□□□ -0.2
COL6A5A8TX70 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.77□□□□□ -0.2
COL6A5A8TX70 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
COL6A5A8TX70 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.77□□□□□ -0.2
COL6A5A8TX70 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
COL6A5A8TX70 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
COL6A5A8TX70 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
COL6A5A8TX70 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
COL6A5A8TX70 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
COL6A5A8TX70 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
COL6A5A8TX70 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
COL6A5A8TX70 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
COL6A5A8TX70 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
COL6A5A8TX70 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL6A5A8TX70 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC13.77□□□□□ -0.21
COL6A5A8TX70 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL6A5A8TX70 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.77□□□□□ -0.21
COL6A5A8TX70 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
COL6A5A8TX70 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COL6A5A8TX70 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms