Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 RN7SL589P-201ENST00000481268 310 ntBASIC19.71■□□□□ 0.75
CCDC85CA6NKD9 AC122714.2-201ENST00000502787 707 ntBASIC19.71■□□□□ 0.75
CCDC85CA6NKD9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC85CA6NKD9 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85CA6NKD9 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC85CA6NKD9 MIR6080-201ENST00000617359 66 ntBASIC19.71■□□□□ 0.75
CCDC85CA6NKD9 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85CA6NKD9 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC85CA6NKD9 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC85CA6NKD9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85CA6NKD9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85CA6NKD9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85CA6NKD9 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC85CA6NKD9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85CA6NKD9 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85CA6NKD9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC85CA6NKD9 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 AL512384.1-201ENST00000406683 331 ntBASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 TPI1-206ENST00000488464 791 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 MIR6727-201ENST00000620702 65 ntBASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 AC084121.4-201ENST00000641598 221 ntBASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 AF228730.8-201ENST00000642140 221 ntBASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC85CA6NKD9 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC85CA6NKD9 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC85CA6NKD9 AL024508.2-201ENST00000607749 1894 ntBASIC19.69■□□□□ 0.74
CCDC85CA6NKD9 TEX21P-204ENST00000641479 1693 ntBASIC19.69■□□□□ 0.74
CCDC85CA6NKD9 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
CCDC85CA6NKD9 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC85CA6NKD9 MPV17-208ENST00000405076 603 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC85CA6NKD9 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC85CA6NKD9 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC85CA6NKD9 RN7SL752P-201ENST00000463779 287 ntBASIC19.69■□□□□ 0.74
CCDC85CA6NKD9 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
CCDC85CA6NKD9 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC85CA6NKD9 AC243562.1-201ENST00000560672 389 ntBASIC19.69■□□□□ 0.74
CCDC85CA6NKD9 RN7SL190P-201ENST00000582519 257 ntBASIC19.69■□□□□ 0.74
CCDC85CA6NKD9 AC099522.2-201ENST00000607001 744 ntBASIC19.69■□□□□ 0.74
CCDC85CA6NKD9 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CCDC85CA6NKD9 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC85CA6NKD9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC85CA6NKD9 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC85CA6NKD9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC85CA6NKD9 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC85CA6NKD9 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC85CA6NKD9 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CCDC85CA6NKD9 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC85CA6NKD9 AC148477.5-201ENST00000625164 1645 ntBASIC19.69■□□□□ 0.74
CCDC85CA6NKD9 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC85CA6NKD9 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC85CA6NKD9 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC85CA6NKD9 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC85CA6NKD9 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CCDC85CA6NKD9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC85CA6NKD9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC85CA6NKD9 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CCDC85CA6NKD9 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC85CA6NKD9 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCDC85CA6NKD9 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.68■□□□□ 0.74
CCDC85CA6NKD9 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.68■□□□□ 0.74
CCDC85CA6NKD9 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC85CA6NKD9 MIR4259-201ENST00000584466 101 ntBASIC19.68■□□□□ 0.74
CCDC85CA6NKD9 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC85CA6NKD9 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC85CA6NKD9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC85CA6NKD9 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC85CA6NKD9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC85CA6NKD9 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC85CA6NKD9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC85CA6NKD9 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC85CA6NKD9 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC85CA6NKD9 AC007541.1-201ENST00000570282 1469 ntBASIC19.67■□□□□ 0.74
CCDC85CA6NKD9 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC85CA6NKD9 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC85CA6NKD9 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms