Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 AC104076.2-201ENST00000448912 469 ntBASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 AL355312.1-201ENST00000407115 2176 ntBASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 AC073508.3-201ENST00000619697 1419 ntBASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2LQ9NUG4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 AC093010.1-201ENST00000473625 1624 ntBASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 AC010947.1-201ENST00000623454 693 ntBASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2LQ9NUG4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 MIR564-202ENST00000385049 94 ntBASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.1■□□□□ 0.33
CCM2LQ9NUG4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms