Protein–RNA interactions for Protein: Q9CYQ5

Hcfc1r1, Host cell factor C1 regulator 1, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1r1Q9CYQ5 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Gm13312-201ENSMUST00000119631 718 ntBASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Gm15794-201ENSMUST00000120182 631 ntBASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.03□□□□□ -0.32
Hcfc1r1Q9CYQ5 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Hcfc1r1Q9CYQ5 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hcfc1r1Q9CYQ5 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Hcfc1r1Q9CYQ5 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Hcfc1r1Q9CYQ5 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Hcfc1r1Q9CYQ5 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.02□□□□□ -0.32
Hcfc1r1Q9CYQ5 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Hcfc1r1Q9CYQ5 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hcfc1r1Q9CYQ5 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hcfc1r1Q9CYQ5 Gm10013-201ENSMUST00000106074 672 ntBASIC13.02□□□□□ -0.33
Hcfc1r1Q9CYQ5 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hcfc1r1Q9CYQ5 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.02□□□□□ -0.33
Hcfc1r1Q9CYQ5 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hcfc1r1Q9CYQ5 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hcfc1r1Q9CYQ5 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.02□□□□□ -0.33
Hcfc1r1Q9CYQ5 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.02□□□□□ -0.33
Hcfc1r1Q9CYQ5 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.02□□□□□ -0.33
Hcfc1r1Q9CYQ5 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hcfc1r1Q9CYQ5 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hcfc1r1Q9CYQ5 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hcfc1r1Q9CYQ5 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hcfc1r1Q9CYQ5 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hcfc1r1Q9CYQ5 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Hcfc1r1Q9CYQ5 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hcfc1r1Q9CYQ5 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Hcfc1r1Q9CYQ5 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hcfc1r1Q9CYQ5 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hcfc1r1Q9CYQ5 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hcfc1r1Q9CYQ5 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hcfc1r1Q9CYQ5 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hcfc1r1Q9CYQ5 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hcfc1r1Q9CYQ5 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hcfc1r1Q9CYQ5 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hcfc1r1Q9CYQ5 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms