Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Gm43195-201ENSMUST00000200614 2332 ntBASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-1Q5R1I8 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3-1Q5R1I8 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3-1Q5R1I8 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3-1Q5R1I8 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC10.15□□□□□ -0.79
Trav3-1Q5R1I8 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.15□□□□□ -0.79
Trav3-1Q5R1I8 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3-1Q5R1I8 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Trav3-1Q5R1I8 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3-1Q5R1I8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3-1Q5R1I8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3-1Q5R1I8 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Gm38327-201ENSMUST00000195852 1755 ntBASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 CT030146.1-201ENSMUST00000220919 217 ntBASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms