Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KCNA1Q09470 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
KCNA1Q09470 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
KCNA1Q09470 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.74■□□□□ 0.75
KCNA1Q09470 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.74■□□□□ 0.75
KCNA1Q09470 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
KCNA1Q09470 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
KCNA1Q09470 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KCNA1Q09470 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
KCNA1Q09470 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KCNA1Q09470 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.74■□□□□ 0.75
KCNA1Q09470 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
KCNA1Q09470 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KCNA1Q09470 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.74■□□□□ 0.75
KCNA1Q09470 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KCNA1Q09470 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KCNA1Q09470 AC134043.2-201ENST00000624206 2238 ntBASIC19.74■□□□□ 0.75
KCNA1Q09470 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KCNA1Q09470 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KCNA1Q09470 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KCNA1Q09470 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.73■□□□□ 0.75
KCNA1Q09470 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
KCNA1Q09470 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.73■□□□□ 0.75
KCNA1Q09470 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KCNA1Q09470 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
KCNA1Q09470 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KCNA1Q09470 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KCNA1Q09470 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KCNA1Q09470 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KCNA1Q09470 AP002383.4-201ENST00000442518 975 ntBASIC19.73■□□□□ 0.75
KCNA1Q09470 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
KCNA1Q09470 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.73■□□□□ 0.75
KCNA1Q09470 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.73■□□□□ 0.75
KCNA1Q09470 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.73■□□□□ 0.75
KCNA1Q09470 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KCNA1Q09470 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
KCNA1Q09470 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
KCNA1Q09470 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.73■□□□□ 0.75
KCNA1Q09470 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
KCNA1Q09470 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KCNA1Q09470 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
KCNA1Q09470 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
KCNA1Q09470 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.72■□□□□ 0.75
KCNA1Q09470 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KCNA1Q09470 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
KCNA1Q09470 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KCNA1Q09470 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KCNA1Q09470 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KCNA1Q09470 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
KCNA1Q09470 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
KCNA1Q09470 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KCNA1Q09470 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KCNA1Q09470 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.72■□□□□ 0.75
KCNA1Q09470 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KCNA1Q09470 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.72■□□□□ 0.75
KCNA1Q09470 MTCL1P1-201ENST00000446207 792 ntBASIC19.72■□□□□ 0.75
KCNA1Q09470 AC112698.1-201ENST00000510299 916 ntBASIC19.72■□□□□ 0.75
KCNA1Q09470 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.72■□□□□ 0.75
KCNA1Q09470 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.72■□□□□ 0.75
KCNA1Q09470 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.72■□□□□ 0.75
KCNA1Q09470 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.72■□□□□ 0.75
KCNA1Q09470 AL592071.1-201ENST00000611956 408 ntBASIC19.72■□□□□ 0.75
KCNA1Q09470 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.72■□□□□ 0.75
KCNA1Q09470 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.72■□□□□ 0.75
KCNA1Q09470 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.72■□□□□ 0.75
KCNA1Q09470 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KCNA1Q09470 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
KCNA1Q09470 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.72■□□□□ 0.75
KCNA1Q09470 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.72■□□□□ 0.75
KCNA1Q09470 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KCNA1Q09470 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KCNA1Q09470 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KCNA1Q09470 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
KCNA1Q09470 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCNA1Q09470 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KCNA1Q09470 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCNA1Q09470 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.71■□□□□ 0.75
KCNA1Q09470 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
KCNA1Q09470 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
KCNA1Q09470 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
KCNA1Q09470 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KCNA1Q09470 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCNA1Q09470 BX276092.5-203ENST00000456199 560 ntBASIC19.71■□□□□ 0.75
KCNA1Q09470 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.71■□□□□ 0.75
KCNA1Q09470 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.71■□□□□ 0.75
KCNA1Q09470 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.71■□□□□ 0.75
KCNA1Q09470 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
KCNA1Q09470 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.71■□□□□ 0.75
KCNA1Q09470 AC124864.1-201ENST00000623408 392 ntBASIC19.71■□□□□ 0.75
KCNA1Q09470 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.71■□□□□ 0.75
KCNA1Q09470 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCNA1Q09470 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCNA1Q09470 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.71■□□□□ 0.75
KCNA1Q09470 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KCNA1Q09470 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCNA1Q09470 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCNA1Q09470 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KCNA1Q09470 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCNA1Q09470 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KCNA1Q09470 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms