Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC20.8■□□□□ 0.92
Stra8P70278 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stra8P70278 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stra8P70278 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Stra8P70278 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stra8P70278 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stra8P70278 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC20.8■□□□□ 0.92
Stra8P70278 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stra8P70278 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stra8P70278 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stra8P70278 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stra8P70278 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Stra8P70278 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stra8P70278 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Stra8P70278 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stra8P70278 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stra8P70278 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Stra8P70278 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stra8P70278 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stra8P70278 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Stra8P70278 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stra8P70278 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stra8P70278 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stra8P70278 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.79■□□□□ 0.92
Stra8P70278 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Stra8P70278 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC20.79■□□□□ 0.92
Stra8P70278 Vti1a-206ENSMUST00000225529 1244 ntBASIC20.79■□□□□ 0.92
Stra8P70278 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stra8P70278 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stra8P70278 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Stra8P70278 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stra8P70278 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Stra8P70278 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stra8P70278 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Stra8P70278 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Stra8P70278 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Stra8P70278 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Stra8P70278 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Stra8P70278 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Stra8P70278 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Stra8P70278 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Stra8P70278 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC20.78■□□□□ 0.92
Stra8P70278 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Stra8P70278 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Stra8P70278 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Stra8P70278 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Stra8P70278 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Stra8P70278 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC20.78■□□□□ 0.92
Stra8P70278 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Stra8P70278 Gm17971-201ENSMUST00000190239 806 ntBASIC20.78■□□□□ 0.92
Stra8P70278 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Stra8P70278 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
Stra8P70278 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Stra8P70278 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Stra8P70278 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Stra8P70278 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Stra8P70278 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Stra8P70278 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Stra8P70278 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Stra8P70278 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Stra8P70278 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Stra8P70278 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Stra8P70278 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
Stra8P70278 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Stra8P70278 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Stra8P70278 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC20.77■□□□□ 0.92
Stra8P70278 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Stra8P70278 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Stra8P70278 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
Stra8P70278 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Stra8P70278 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.77■□□□□ 0.92
Stra8P70278 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Stra8P70278 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Stra8P70278 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC20.77■□□□□ 0.92
Stra8P70278 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Stra8P70278 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Stra8P70278 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC20.77■□□□□ 0.92
Stra8P70278 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Stra8P70278 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC20.77■□□□□ 0.92
Stra8P70278 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Stra8P70278 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Stra8P70278 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Stra8P70278 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Stra8P70278 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Stra8P70278 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Stra8P70278 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Stra8P70278 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Stra8P70278 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Stra8P70278 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Stra8P70278 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Stra8P70278 Gm24589-201ENSMUST00000116692 94 ntBASIC20.76■□□□□ 0.91
Stra8P70278 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Stra8P70278 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Stra8P70278 Gm7556-201ENSMUST00000201178 1084 ntBASIC20.76■□□□□ 0.91
Stra8P70278 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
Stra8P70278 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Stra8P70278 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Stra8P70278 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Stra8P70278 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Stra8P70278 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms