Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.56□□□□□ -0.4
Col8a2P25318 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.56□□□□□ -0.4
Col8a2P25318 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Col8a2P25318 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.55□□□□□ -0.4
Col8a2P25318 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Efs-202ENSMUST00000227037 2540 ntBASIC12.55□□□□□ -0.4
Col8a2P25318 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Col8a2P25318 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.55□□□□□ -0.4
Col8a2P25318 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Gm26308-201ENSMUST00000157768 69 ntBASIC12.55□□□□□ -0.4
Col8a2P25318 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Gm2756-201ENSMUST00000195851 400 ntBASIC12.55□□□□□ -0.4
Col8a2P25318 Gm44335-201ENSMUST00000196879 141 ntBASIC12.55□□□□□ -0.4
Col8a2P25318 Gm44297-201ENSMUST00000198304 141 ntBASIC12.55□□□□□ -0.4
Col8a2P25318 Gm44346-201ENSMUST00000198851 141 ntBASIC12.55□□□□□ -0.4
Col8a2P25318 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.55□□□□□ -0.4
Col8a2P25318 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.55□□□□□ -0.4
Col8a2P25318 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.55□□□□□ -0.4
Col8a2P25318 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Col8a2P25318 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Col8a2P25318 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col8a2P25318 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Col8a2P25318 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col8a2P25318 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col8a2P25318 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.54□□□□□ -0.4
Col8a2P25318 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col8a2P25318 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col8a2P25318 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Col8a2P25318 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.54□□□□□ -0.4
Col8a2P25318 Celf4-206ENSMUST00000224553 1729 ntBASIC12.54□□□□□ -0.4
Col8a2P25318 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col8a2P25318 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col8a2P25318 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.54□□□□□ -0.4
Col8a2P25318 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col8a2P25318 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.54□□□□□ -0.4
Col8a2P25318 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col8a2P25318 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col8a2P25318 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.54□□□□□ -0.4
Col8a2P25318 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.54□□□□□ -0.4
Col8a2P25318 Gm15483-201ENSMUST00000120338 456 ntBASIC12.54□□□□□ -0.4
Col8a2P25318 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.54□□□□□ -0.4
Col8a2P25318 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.54□□□□□ -0.4
Col8a2P25318 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col8a2P25318 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms