Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RAB4AP20338 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB4AP20338 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB4AP20338 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB4AP20338 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RAB4AP20338 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
RAB4AP20338 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
RAB4AP20338 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB4AP20338 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAB4AP20338 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RAB4AP20338 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.8□□□□□ -0.2
RAB4AP20338 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB4AP20338 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RAB4AP20338 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RAB4AP20338 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC13.8□□□□□ -0.2
RAB4AP20338 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB4AP20338 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAB4AP20338 AL355472.2-201ENST00000422958 438 ntBASIC13.8□□□□□ -0.2
RAB4AP20338 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.8□□□□□ -0.2
RAB4AP20338 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.8□□□□□ -0.2
RAB4AP20338 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.8□□□□□ -0.2
RAB4AP20338 AL589743.5-201ENST00000616611 1050 ntBASIC13.8□□□□□ -0.2
RAB4AP20338 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB4AP20338 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
RAB4AP20338 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB4AP20338 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB4AP20338 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC13.8□□□□□ -0.2
RAB4AP20338 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.8□□□□□ -0.2
RAB4AP20338 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAB4AP20338 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC13.8□□□□□ -0.2
RAB4AP20338 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAB4AP20338 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAB4AP20338 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.8□□□□□ -0.2
RAB4AP20338 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC13.8□□□□□ -0.2
RAB4AP20338 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB4AP20338 LINC02199-201ENST00000506655 2702 ntBASIC13.8□□□□□ -0.2
RAB4AP20338 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.8□□□□□ -0.2
RAB4AP20338 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
RAB4AP20338 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAB4AP20338 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAB4AP20338 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC13.8□□□□□ -0.2
RAB4AP20338 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC13.8□□□□□ -0.2
RAB4AP20338 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB4AP20338 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC13.8□□□□□ -0.2
RAB4AP20338 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.8□□□□□ -0.2
RAB4AP20338 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RAB4AP20338 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RAB4AP20338 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.79□□□□□ -0.2
RAB4AP20338 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB4AP20338 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB4AP20338 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB4AP20338 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
RAB4AP20338 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
RAB4AP20338 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RAB4AP20338 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB4AP20338 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.79□□□□□ -0.2
RAB4AP20338 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB4AP20338 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB4AP20338 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB4AP20338 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
RAB4AP20338 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
RAB4AP20338 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB4AP20338 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC13.79□□□□□ -0.2
RAB4AP20338 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB4AP20338 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB4AP20338 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC13.79□□□□□ -0.2
RAB4AP20338 KRT18P61-201ENST00000585825 1298 ntBASIC13.79□□□□□ -0.2
RAB4AP20338 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB4AP20338 NXN-202ENST00000537628 1340 ntTSL 3 BASIC13.79□□□□□ -0.2
RAB4AP20338 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB4AP20338 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB4AP20338 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
RAB4AP20338 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB4AP20338 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB4AP20338 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB4AP20338 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB4AP20338 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB4AP20338 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB4AP20338 MOK-233ENST00000524214 1539 ntTSL 2 BASIC13.79□□□□□ -0.2
RAB4AP20338 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB4AP20338 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB4AP20338 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB4AP20338 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB4AP20338 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RAB4AP20338 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RAB4AP20338 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB4AP20338 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB4AP20338 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB4AP20338 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB4AP20338 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB4AP20338 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB4AP20338 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.78□□□□□ -0.2
RAB4AP20338 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB4AP20338 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB4AP20338 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB4AP20338 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
RAB4AP20338 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB4AP20338 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB4AP20338 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
RAB4AP20338 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms