Protein–RNA interactions for Protein: P09084

Pax1, Paired box protein Pax-1, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pax1P09084 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pax1P09084 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.25□□□□□ -0.45
Pax1P09084 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pax1P09084 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Pax1P09084 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.25□□□□□ -0.45
Pax1P09084 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.25□□□□□ -0.45
Pax1P09084 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.25□□□□□ -0.45
Pax1P09084 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.25□□□□□ -0.45
Pax1P09084 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pax1P09084 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pax1P09084 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pax1P09084 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.25□□□□□ -0.45
Pax1P09084 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pax1P09084 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pax1P09084 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pax1P09084 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pax1P09084 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pax1P09084 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pax1P09084 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pax1P09084 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pax1P09084 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pax1P09084 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pax1P09084 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.25□□□□□ -0.45
Pax1P09084 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pax1P09084 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pax1P09084 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.25□□□□□ -0.45
Pax1P09084 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pax1P09084 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pax1P09084 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Pax1P09084 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.24□□□□□ -0.45
Pax1P09084 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Pax1P09084 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pax1P09084 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pax1P09084 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pax1P09084 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pax1P09084 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pax1P09084 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pax1P09084 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pax1P09084 Gm12008-201ENSMUST00000117791 755 ntBASIC12.24□□□□□ -0.45
Pax1P09084 Gm11950-201ENSMUST00000121615 838 ntBASIC12.24□□□□□ -0.45
Pax1P09084 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pax1P09084 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pax1P09084 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pax1P09084 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Pax1P09084 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.24□□□□□ -0.45
Pax1P09084 Mir7071-201ENSMUST00000184847 69 ntBASIC12.24□□□□□ -0.45
Pax1P09084 Gm5244-202ENSMUST00000189517 743 ntBASIC12.24□□□□□ -0.45
Pax1P09084 Gm17808-201ENSMUST00000200859 894 ntBASIC12.24□□□□□ -0.45
Pax1P09084 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC12.24□□□□□ -0.45
Pax1P09084 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pax1P09084 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pax1P09084 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pax1P09084 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pax1P09084 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pax1P09084 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pax1P09084 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pax1P09084 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pax1P09084 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pax1P09084 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pax1P09084 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pax1P09084 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.24□□□□□ -0.45
Pax1P09084 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pax1P09084 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pax1P09084 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pax1P09084 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pax1P09084 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pax1P09084 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.23□□□□□ -0.45
Pax1P09084 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pax1P09084 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.23□□□□□ -0.45
Pax1P09084 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pax1P09084 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pax1P09084 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pax1P09084 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pax1P09084 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pax1P09084 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Pax1P09084 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pax1P09084 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pax1P09084 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pax1P09084 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pax1P09084 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pax1P09084 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pax1P09084 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.23□□□□□ -0.45
Pax1P09084 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pax1P09084 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Pax1P09084 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pax1P09084 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pax1P09084 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pax1P09084 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pax1P09084 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.23□□□□□ -0.45
Pax1P09084 Gm18363-201ENSMUST00000221671 730 ntBASIC12.23□□□□□ -0.45
Pax1P09084 AC106830.1-201ENSMUST00000228032 1003 ntBASIC12.23□□□□□ -0.45
Pax1P09084 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pax1P09084 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.23□□□□□ -0.45
Pax1P09084 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pax1P09084 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pax1P09084 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pax1P09084 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pax1P09084 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pax1P09084 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pax1P09084 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms