Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb3Q91XZ7 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb3Q91XZ7 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb3Q91XZ7 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pcdhb3Q91XZ7 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb3Q91XZ7 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb3Q91XZ7 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb3Q91XZ7 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb3Q91XZ7 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb3Q91XZ7 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb3Q91XZ7 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.13■□□□□ 0.01
Pcdhb3Q91XZ7 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb3Q91XZ7 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb3Q91XZ7 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pcdhb3Q91XZ7 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb3Q91XZ7 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb3Q91XZ7 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb3Q91XZ7 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb3Q91XZ7 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb3Q91XZ7 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.13■□□□□ 0.01
Pcdhb3Q91XZ7 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb3Q91XZ7 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhb3Q91XZ7 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdhb3Q91XZ7 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb3Q91XZ7 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb3Q91XZ7 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb3Q91XZ7 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb3Q91XZ7 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhb3Q91XZ7 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb3Q91XZ7 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.12■□□□□ 0.01
Pcdhb3Q91XZ7 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.12■□□□□ 0.01
Pcdhb3Q91XZ7 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.12■□□□□ 0.01
Pcdhb3Q91XZ7 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhb3Q91XZ7 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb3Q91XZ7 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Pcdhb3Q91XZ7 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb3Q91XZ7 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb3Q91XZ7 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb3Q91XZ7 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb3Q91XZ7 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb3Q91XZ7 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhb3Q91XZ7 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb3Q91XZ7 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb3Q91XZ7 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb3Q91XZ7 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb3Q91XZ7 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb3Q91XZ7 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb3Q91XZ7 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb3Q91XZ7 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb3Q91XZ7 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb3Q91XZ7 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb3Q91XZ7 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb3Q91XZ7 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb3Q91XZ7 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb3Q91XZ7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb3Q91XZ7 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.11■□□□□ 0.01
Pcdhb3Q91XZ7 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb3Q91XZ7 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.11■□□□□ 0.01
Pcdhb3Q91XZ7 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC15.11■□□□□ 0.01
Pcdhb3Q91XZ7 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.11■□□□□ 0.01
Pcdhb3Q91XZ7 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb3Q91XZ7 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Pcdhb3Q91XZ7 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb3Q91XZ7 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb3Q91XZ7 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb3Q91XZ7 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb3Q91XZ7 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb3Q91XZ7 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb3Q91XZ7 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb3Q91XZ7 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb3Q91XZ7 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb3Q91XZ7 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms