Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh2P43247 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh2P43247 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh2P43247 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Msh2P43247 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.55■□□□□ 0.08
Msh2P43247 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.55■□□□□ 0.08
Msh2P43247 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.55■□□□□ 0.08
Msh2P43247 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.55■□□□□ 0.08
Msh2P43247 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.55■□□□□ 0.08
Msh2P43247 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.55■□□□□ 0.08
Msh2P43247 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh2P43247 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.55■□□□□ 0.08
Msh2P43247 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.55■□□□□ 0.08
Msh2P43247 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.55■□□□□ 0.08
Msh2P43247 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.55■□□□□ 0.08
Msh2P43247 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.55■□□□□ 0.08
Msh2P43247 Gm8825-201ENSMUST00000182565 998 ntBASIC15.55■□□□□ 0.08
Msh2P43247 Gm4518-201ENSMUST00000182638 718 ntBASIC15.55■□□□□ 0.08
Msh2P43247 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.55■□□□□ 0.08
Msh2P43247 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.55■□□□□ 0.08
Msh2P43247 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.55■□□□□ 0.08
Msh2P43247 Gm27741-201ENSMUST00000185060 237 ntBASIC15.55■□□□□ 0.08
Msh2P43247 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Msh2P43247 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.55■□□□□ 0.08
Msh2P43247 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.55■□□□□ 0.08
Msh2P43247 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh2P43247 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Msh2P43247 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.55■□□□□ 0.08
Msh2P43247 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.55■□□□□ 0.08
Msh2P43247 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Msh2P43247 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh2P43247 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh2P43247 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh2P43247 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh2P43247 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh2P43247 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Msh2P43247 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh2P43247 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Msh2P43247 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.55■□□□□ 0.08
Msh2P43247 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Msh2P43247 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Msh2P43247 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Msh2P43247 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh2P43247 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh2P43247 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh2P43247 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh2P43247 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Msh2P43247 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh2P43247 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh2P43247 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh2P43247 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.54■□□□□ 0.08
Msh2P43247 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Msh2P43247 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh2P43247 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Msh2P43247 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Msh2P43247 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.54■□□□□ 0.08
Msh2P43247 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.54■□□□□ 0.08
Msh2P43247 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh2P43247 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh2P43247 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh2P43247 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh2P43247 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh2P43247 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.54■□□□□ 0.08
Msh2P43247 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh2P43247 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh2P43247 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh2P43247 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh2P43247 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Msh2P43247 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Msh2P43247 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh2P43247 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh2P43247 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Msh2P43247 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.54■□□□□ 0.08
Msh2P43247 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh2P43247 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.53■□□□□ 0.08
Msh2P43247 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Msh2P43247 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh2P43247 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh2P43247 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.53■□□□□ 0.08
Msh2P43247 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Msh2P43247 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh2P43247 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh2P43247 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Msh2P43247 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh2P43247 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh2P43247 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.53■□□□□ 0.08
Msh2P43247 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh2P43247 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.53■□□□□ 0.08
Msh2P43247 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.53■□□□□ 0.08
Msh2P43247 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.53■□□□□ 0.08
Msh2P43247 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.53■□□□□ 0.08
Msh2P43247 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Msh2P43247 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh2P43247 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh2P43247 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Msh2P43247 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh2P43247 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.53■□□□□ 0.08
Msh2P43247 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh2P43247 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh2P43247 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms