Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col8a2P25318 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col8a2P25318 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Col8a2P25318 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col8a2P25318 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Col8a2P25318 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.58□□□□□ -0.4
Col8a2P25318 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col8a2P25318 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col8a2P25318 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col8a2P25318 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col8a2P25318 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col8a2P25318 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Col8a2P25318 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col8a2P25318 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col8a2P25318 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.58□□□□□ -0.4
Col8a2P25318 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col8a2P25318 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col8a2P25318 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.58□□□□□ -0.4
Col8a2P25318 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.58□□□□□ -0.4
Col8a2P25318 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col8a2P25318 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col8a2P25318 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.58□□□□□ -0.4
Col8a2P25318 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col8a2P25318 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Col8a2P25318 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.58□□□□□ -0.4
Col8a2P25318 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Col8a2P25318 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Col8a2P25318 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col8a2P25318 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.58□□□□□ -0.4
Col8a2P25318 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col8a2P25318 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Col8a2P25318 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col8a2P25318 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col8a2P25318 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Col8a2P25318 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.58□□□□□ -0.4
Col8a2P25318 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
Col8a2P25318 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Col8a2P25318 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col8a2P25318 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col8a2P25318 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col8a2P25318 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col8a2P25318 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.57□□□□□ -0.4
Col8a2P25318 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Col8a2P25318 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Col8a2P25318 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Col8a2P25318 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col8a2P25318 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col8a2P25318 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col8a2P25318 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col8a2P25318 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col8a2P25318 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col8a2P25318 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col8a2P25318 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Col8a2P25318 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col8a2P25318 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.57□□□□□ -0.4
Col8a2P25318 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.57□□□□□ -0.4
Col8a2P25318 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.57□□□□□ -0.4
Col8a2P25318 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.57□□□□□ -0.4
Col8a2P25318 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.57□□□□□ -0.4
Col8a2P25318 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col8a2P25318 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col8a2P25318 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.57□□□□□ -0.4
Col8a2P25318 Gm10154-201ENSMUST00000084445 354 ntBASIC12.57□□□□□ -0.4
Col8a2P25318 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.57□□□□□ -0.4
Col8a2P25318 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col8a2P25318 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col8a2P25318 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col8a2P25318 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col8a2P25318 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col8a2P25318 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Col8a2P25318 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col8a2P25318 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col8a2P25318 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.57□□□□□ -0.4
Col8a2P25318 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.57□□□□□ -0.4
Col8a2P25318 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col8a2P25318 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col8a2P25318 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col8a2P25318 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Col8a2P25318 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Col8a2P25318 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Col8a2P25318 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Col8a2P25318 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.56□□□□□ -0.4
Col8a2P25318 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.56□□□□□ -0.4
Col8a2P25318 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Col8a2P25318 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Col8a2P25318 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.56□□□□□ -0.4
Col8a2P25318 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col8a2P25318 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms