Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 AC092647.4-201ENST00000457211 535 ntBASIC20.76■□□□□ 0.91
ATP2B1P20020 AL136038.4-201ENST00000603606 1261 ntBASIC20.76■□□□□ 0.91
ATP2B1P20020 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2B1P20020 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2B1P20020 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2B1P20020 AC020916.1-201ENST00000587762 1774 ntBASIC20.76■□□□□ 0.91
ATP2B1P20020 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2B1P20020 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2B1P20020 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2B1P20020 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
ATP2B1P20020 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2B1P20020 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2B1P20020 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP2B1P20020 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B1P20020 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B1P20020 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.75■□□□□ 0.91
ATP2B1P20020 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B1P20020 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B1P20020 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.75■□□□□ 0.91
ATP2B1P20020 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.75■□□□□ 0.91
ATP2B1P20020 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.75■□□□□ 0.91
ATP2B1P20020 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B1P20020 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B1P20020 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B1P20020 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
ATP2B1P20020 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ATP2B1P20020 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B1P20020 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B1P20020 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B1P20020 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
ATP2B1P20020 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
ATP2B1P20020 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B1P20020 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B1P20020 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.75■□□□□ 0.91
ATP2B1P20020 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B1P20020 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B1P20020 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B1P20020 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B1P20020 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B1P20020 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B1P20020 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B1P20020 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B1P20020 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP2B1P20020 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B1P20020 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.74■□□□□ 0.91
ATP2B1P20020 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP2B1P20020 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B1P20020 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
ATP2B1P20020 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B1P20020 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B1P20020 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.74■□□□□ 0.91
ATP2B1P20020 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ATP2B1P20020 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ATP2B1P20020 AC112907.2-201ENST00000448639 330 ntBASIC20.74■□□□□ 0.91
ATP2B1P20020 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B1P20020 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B1P20020 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B1P20020 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.74■□□□□ 0.91
ATP2B1P20020 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.74■□□□□ 0.91
ATP2B1P20020 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.74■□□□□ 0.91
ATP2B1P20020 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.74■□□□□ 0.91
ATP2B1P20020 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP2B1P20020 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B1P20020 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B1P20020 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B1P20020 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B1P20020 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP2B1P20020 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP2B1P20020 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B1P20020 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B1P20020 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B1P20020 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B1P20020 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B1P20020 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B1P20020 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B1P20020 LINC00602-201ENST00000629776 2065 ntBASIC20.73■□□□□ 0.91
ATP2B1P20020 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B1P20020 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
ATP2B1P20020 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B1P20020 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.73■□□□□ 0.91
ATP2B1P20020 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B1P20020 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B1P20020 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ATP2B1P20020 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ATP2B1P20020 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
ATP2B1P20020 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.73■□□□□ 0.91
ATP2B1P20020 DUX4L26-201ENST00000489078 1255 ntBASIC20.73■□□□□ 0.91
ATP2B1P20020 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B1P20020 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ATP2B1P20020 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.73■□□□□ 0.91
ATP2B1P20020 AC093010.1-201ENST00000473625 1624 ntBASIC20.73■□□□□ 0.91
ATP2B1P20020 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B1P20020 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ATP2B1P20020 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B1P20020 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
ATP2B1P20020 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B1P20020 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.73■□□□□ 0.91
ATP2B1P20020 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2B1P20020 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
ATP2B1P20020 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms