Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH16O75309 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CDH16O75309 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CDH16O75309 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH16O75309 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH16O75309 CA15P1-201ENST00000481698 905 ntBASIC18.21■□□□□ 0.51
CDH16O75309 AC009065.1-201ENST00000564055 1225 ntBASIC18.21■□□□□ 0.51
CDH16O75309 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH16O75309 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CDH16O75309 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CDH16O75309 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH16O75309 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH16O75309 AL118508.1-201ENST00000613502 2345 ntBASIC18.21■□□□□ 0.51
CDH16O75309 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.21■□□□□ 0.51
CDH16O75309 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH16O75309 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.21■□□□□ 0.5
CDH16O75309 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
CDH16O75309 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
CDH16O75309 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH16O75309 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CDH16O75309 AL024508.2-201ENST00000607749 1894 ntBASIC18.2■□□□□ 0.5
CDH16O75309 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH16O75309 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH16O75309 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH16O75309 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH16O75309 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CDH16O75309 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH16O75309 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH16O75309 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CDH16O75309 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH16O75309 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH16O75309 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH16O75309 MESTP1-201ENST00000404287 994 ntBASIC18.2■□□□□ 0.5
CDH16O75309 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.2■□□□□ 0.5
CDH16O75309 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CDH16O75309 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH16O75309 AF186192.3-201ENST00000583427 947 ntBASIC18.2■□□□□ 0.5
CDH16O75309 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH16O75309 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH16O75309 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH16O75309 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH16O75309 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH16O75309 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH16O75309 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH16O75309 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH16O75309 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH16O75309 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH16O75309 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH16O75309 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.19■□□□□ 0.5
CDH16O75309 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.19■□□□□ 0.5
CDH16O75309 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH16O75309 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.19■□□□□ 0.5
CDH16O75309 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.19■□□□□ 0.5
CDH16O75309 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH16O75309 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.19■□□□□ 0.5
CDH16O75309 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CDH16O75309 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.19■□□□□ 0.5
CDH16O75309 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CDH16O75309 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.19■□□□□ 0.5
CDH16O75309 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CDH16O75309 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CDH16O75309 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.19■□□□□ 0.5
CDH16O75309 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.19■□□□□ 0.5
CDH16O75309 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH16O75309 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CDH16O75309 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.19■□□□□ 0.5
CDH16O75309 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
CDH16O75309 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH16O75309 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.19■□□□□ 0.5
CDH16O75309 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH16O75309 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CDH16O75309 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.19■□□□□ 0.5
CDH16O75309 AC100803.2-201ENST00000562459 1963 ntBASIC18.19■□□□□ 0.5
CDH16O75309 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.19■□□□□ 0.5
CDH16O75309 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH16O75309 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.18■□□□□ 0.5
CDH16O75309 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH16O75309 LINC00304-203ENST00000565008 1864 ntBASIC18.18■□□□□ 0.5
CDH16O75309 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH16O75309 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH16O75309 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH16O75309 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH16O75309 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH16O75309 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CDH16O75309 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH16O75309 PRORSD1P-201ENST00000295112 541 ntBASIC18.18■□□□□ 0.5
CDH16O75309 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH16O75309 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.18■□□□□ 0.5
CDH16O75309 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.18■□□□□ 0.5
CDH16O75309 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.18■□□□□ 0.5
CDH16O75309 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.18■□□□□ 0.5
CDH16O75309 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH16O75309 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH16O75309 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.18■□□□□ 0.5
CDH16O75309 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.18■□□□□ 0.5
CDH16O75309 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH16O75309 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH16O75309 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH16O75309 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH16O75309 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms