Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-2D3Z4R4 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-2D3Z4R4 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Nkx6-2D3Z4R4 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-2D3Z4R4 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-2D3Z4R4 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-2D3Z4R4 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx6-2D3Z4R4 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx6-2D3Z4R4 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Nkx6-2D3Z4R4 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.27□□□□□ -0.44
Nkx6-2D3Z4R4 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.27□□□□□ -0.44
Nkx6-2D3Z4R4 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Nkx6-2D3Z4R4 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx6-2D3Z4R4 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx6-2D3Z4R4 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.27□□□□□ -0.44
Nkx6-2D3Z4R4 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx6-2D3Z4R4 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx6-2D3Z4R4 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx6-2D3Z4R4 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-2D3Z4R4 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-2D3Z4R4 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Nkx6-2D3Z4R4 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-2D3Z4R4 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-2D3Z4R4 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.26□□□□□ -0.45
Nkx6-2D3Z4R4 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Nkx6-2D3Z4R4 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-2D3Z4R4 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-2D3Z4R4 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx6-2D3Z4R4 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.26□□□□□ -0.45
Nkx6-2D3Z4R4 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms