Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav16A0A075B653 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Gm45058-201ENSMUST00000205810 766 ntBASIC11.69□□□□□ -0.54
Trav16A0A075B653 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav16A0A075B653 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Trav16A0A075B653 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16A0A075B653 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16A0A075B653 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16A0A075B653 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16A0A075B653 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16A0A075B653 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16A0A075B653 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.68□□□□□ -0.54
Trav16A0A075B653 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16A0A075B653 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.68□□□□□ -0.54
Trav16A0A075B653 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16A0A075B653 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16A0A075B653 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav16A0A075B653 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16A0A075B653 Gm13559-201ENSMUST00000120476 863 ntBASIC11.68□□□□□ -0.54
Trav16A0A075B653 Gm11355-201ENSMUST00000121120 306 ntBASIC11.68□□□□□ -0.54
Trav16A0A075B653 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav16A0A075B653 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC11.68□□□□□ -0.54
Trav16A0A075B653 Gm18959-201ENSMUST00000208954 655 ntBASIC11.68□□□□□ -0.54
Trav16A0A075B653 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC11.68□□□□□ -0.54
Trav16A0A075B653 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.68□□□□□ -0.54
Trav16A0A075B653 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16A0A075B653 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16A0A075B653 Gm9987-201ENSMUST00000069768 567 ntBASIC11.68□□□□□ -0.54
Trav16A0A075B653 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav16A0A075B653 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16A0A075B653 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav16A0A075B653 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16A0A075B653 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16A0A075B653 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav16A0A075B653 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.68□□□□□ -0.54
Trav16A0A075B653 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16A0A075B653 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav16A0A075B653 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16A0A075B653 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16A0A075B653 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16A0A075B653 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16A0A075B653 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16A0A075B653 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav16A0A075B653 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.67□□□□□ -0.54
Trav16A0A075B653 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16A0A075B653 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16A0A075B653 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16A0A075B653 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16A0A075B653 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav16A0A075B653 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16A0A075B653 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Trav16A0A075B653 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Trav16A0A075B653 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16A0A075B653 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16A0A075B653 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16A0A075B653 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16A0A075B653 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Trav16A0A075B653 Gm21559-201ENSMUST00000220638 855 ntBASIC11.67□□□□□ -0.54
Trav16A0A075B653 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16A0A075B653 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16A0A075B653 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16A0A075B653 Gm8587-201ENSMUST00000076538 843 ntBASIC11.67□□□□□ -0.54
Trav16A0A075B653 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16A0A075B653 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16A0A075B653 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Trav16A0A075B653 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.67□□□□□ -0.54
Trav16A0A075B653 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav16A0A075B653 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16A0A075B653 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16A0A075B653 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16A0A075B653 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16A0A075B653 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16A0A075B653 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav16A0A075B653 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16A0A075B653 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms