Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.45■□□□□ 0.06
Clcn2Q9R0A1 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn2Q9R0A1 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.45■□□□□ 0.06
Clcn2Q9R0A1 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn2Q9R0A1 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn2Q9R0A1 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Gm4535-201ENSMUST00000182274 558 ntBASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Gm8825-201ENSMUST00000182565 998 ntBASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Gm4518-201ENSMUST00000182638 718 ntBASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Gm10355-201ENSMUST00000097146 517 ntBASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn2Q9R0A1 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Gm13418-201ENSMUST00000119097 944 ntBASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Gm18622-201ENSMUST00000219361 595 ntBASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn2Q9R0A1 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Clcn2Q9R0A1 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Clcn2Q9R0A1 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Clcn2Q9R0A1 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clcn2Q9R0A1 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Clcn2Q9R0A1 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clcn2Q9R0A1 Gm25990-201ENSMUST00000102440 86 ntBASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms