Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Gm43347-201ENSMUST00000200226 580 ntBASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Gm34391-201ENSMUST00000203706 907 ntBASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf111Q99ML9 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf111Q99ML9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf111Q99ML9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf111Q99ML9 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf111Q99ML9 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf111Q99ML9 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Rnf111Q99ML9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf111Q99ML9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Rnf111Q99ML9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf111Q99ML9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf111Q99ML9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf111Q99ML9 Gm24589-201ENSMUST00000116692 94 ntBASIC14.66□□□□□ -0.06
Rnf111Q99ML9 Gm8097-201ENSMUST00000117903 829 ntBASIC14.66□□□□□ -0.06
Rnf111Q99ML9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.66□□□□□ -0.06
Rnf111Q99ML9 Gm17971-201ENSMUST00000190239 806 ntBASIC14.66□□□□□ -0.06
Rnf111Q99ML9 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.66□□□□□ -0.06
Rnf111Q99ML9 Gm8655-201ENSMUST00000221159 852 ntBASIC14.66□□□□□ -0.06
Rnf111Q99ML9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Rnf111Q99ML9 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf111Q99ML9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf111Q99ML9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf111Q99ML9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf111Q99ML9 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf111Q99ML9 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf111Q99ML9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.66□□□□□ -0.06
Rnf111Q99ML9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf111Q99ML9 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf111Q99ML9 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Rnf111Q99ML9 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf111Q99ML9 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf111Q99ML9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf111Q99ML9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf111Q99ML9 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf111Q99ML9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf111Q99ML9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf111Q99ML9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.65□□□□□ -0.06
Rnf111Q99ML9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf111Q99ML9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Rnf111Q99ML9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf111Q99ML9 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.65□□□□□ -0.06
Rnf111Q99ML9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf111Q99ML9 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf111Q99ML9 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf111Q99ML9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf111Q99ML9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Rnf111Q99ML9 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf111Q99ML9 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf111Q99ML9 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.65□□□□□ -0.06
Rnf111Q99ML9 Grk6-207ENSMUST00000225925 2769 ntBASIC14.65□□□□□ -0.06
Rnf111Q99ML9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf111Q99ML9 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Rnf111Q99ML9 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms