Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Thumpd1Q99J36 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Thumpd1Q99J36 Gm23547-201ENSMUST00000158210 271 ntBASIC13.48□□□□□ -0.25
Thumpd1Q99J36 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Thumpd1Q99J36 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Thumpd1Q99J36 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.48□□□□□ -0.25
Thumpd1Q99J36 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.48□□□□□ -0.25
Thumpd1Q99J36 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.48□□□□□ -0.25
Thumpd1Q99J36 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Thumpd1Q99J36 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Thumpd1Q99J36 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Thumpd1Q99J36 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Thumpd1Q99J36 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Thumpd1Q99J36 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Thumpd1Q99J36 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Thumpd1Q99J36 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Thumpd1Q99J36 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Thumpd1Q99J36 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Thumpd1Q99J36 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.48□□□□□ -0.25
Thumpd1Q99J36 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Thumpd1Q99J36 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Gm11950-201ENSMUST00000121615 838 ntBASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Gm44454-201ENSMUST00000198541 138 ntBASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Thumpd1Q99J36 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.46□□□□□ -0.25
Thumpd1Q99J36 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Thumpd1Q99J36 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Thumpd1Q99J36 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Thumpd1Q99J36 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Thumpd1Q99J36 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Thumpd1Q99J36 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Thumpd1Q99J36 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Thumpd1Q99J36 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Thumpd1Q99J36 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Thumpd1Q99J36 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Thumpd1Q99J36 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Thumpd1Q99J36 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Thumpd1Q99J36 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Thumpd1Q99J36 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
Thumpd1Q99J36 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.46□□□□□ -0.25
Thumpd1Q99J36 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Thumpd1Q99J36 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Thumpd1Q99J36 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.46□□□□□ -0.25
Thumpd1Q99J36 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Thumpd1Q99J36 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.46□□□□□ -0.25
Thumpd1Q99J36 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Thumpd1Q99J36 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.46□□□□□ -0.25
Thumpd1Q99J36 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Thumpd1Q99J36 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Thumpd1Q99J36 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Thumpd1Q99J36 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Thumpd1Q99J36 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Thumpd1Q99J36 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Thumpd1Q99J36 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Thumpd1Q99J36 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Thumpd1Q99J36 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Thumpd1Q99J36 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Thumpd1Q99J36 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.46□□□□□ -0.26
Thumpd1Q99J36 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.46□□□□□ -0.26
Thumpd1Q99J36 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
Thumpd1Q99J36 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Thumpd1Q99J36 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.26
Thumpd1Q99J36 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms