Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NOTCH4Q99466 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NOTCH4Q99466 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NOTCH4Q99466 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NOTCH4Q99466 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.46■□□□□ 0.55
NOTCH4Q99466 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NOTCH4Q99466 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NOTCH4Q99466 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.46■□□□□ 0.55
NOTCH4Q99466 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NOTCH4Q99466 ELK2BP-201ENST00000415014 1224 ntBASIC18.46■□□□□ 0.55
NOTCH4Q99466 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.46■□□□□ 0.55
NOTCH4Q99466 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.46■□□□□ 0.55
NOTCH4Q99466 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.46■□□□□ 0.55
NOTCH4Q99466 AC002347.1-201ENST00000569543 541 ntBASIC18.46■□□□□ 0.55
NOTCH4Q99466 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.46■□□□□ 0.55
NOTCH4Q99466 AC006557.2-201ENST00000592985 1240 ntBASIC18.46■□□□□ 0.55
NOTCH4Q99466 AL022326.1-202ENST00000641533 845 ntBASIC18.46■□□□□ 0.55
NOTCH4Q99466 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NOTCH4Q99466 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
NOTCH4Q99466 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NOTCH4Q99466 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NOTCH4Q99466 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
NOTCH4Q99466 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NOTCH4Q99466 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
NOTCH4Q99466 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NOTCH4Q99466 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NOTCH4Q99466 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NOTCH4Q99466 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NOTCH4Q99466 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NOTCH4Q99466 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
NOTCH4Q99466 AC108073.2-201ENST00000464002 357 ntBASIC18.45■□□□□ 0.54
NOTCH4Q99466 AC112482.1-201ENST00000492080 688 ntBASIC18.45■□□□□ 0.54
NOTCH4Q99466 RNA5SP416-201ENST00000516838 111 ntBASIC18.45■□□□□ 0.54
NOTCH4Q99466 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.45■□□□□ 0.54
NOTCH4Q99466 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.45■□□□□ 0.54
NOTCH4Q99466 AL691403.2-201ENST00000618460 490 ntBASIC18.45■□□□□ 0.54
NOTCH4Q99466 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NOTCH4Q99466 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.45■□□□□ 0.54
NOTCH4Q99466 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
NOTCH4Q99466 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
NOTCH4Q99466 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NOTCH4Q99466 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NOTCH4Q99466 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
NOTCH4Q99466 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
NOTCH4Q99466 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.45■□□□□ 0.54
NOTCH4Q99466 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
NOTCH4Q99466 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NOTCH4Q99466 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.45■□□□□ 0.54
NOTCH4Q99466 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NOTCH4Q99466 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.45■□□□□ 0.54
NOTCH4Q99466 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.45■□□□□ 0.54
NOTCH4Q99466 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.45■□□□□ 0.54
NOTCH4Q99466 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NOTCH4Q99466 AC006504.4-201ENST00000592118 1568 ntBASIC18.45■□□□□ 0.54
NOTCH4Q99466 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.45■□□□□ 0.54
NOTCH4Q99466 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NOTCH4Q99466 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.44■□□□□ 0.54
NOTCH4Q99466 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NOTCH4Q99466 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NOTCH4Q99466 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.44■□□□□ 0.54
NOTCH4Q99466 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NOTCH4Q99466 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NOTCH4Q99466 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.44■□□□□ 0.54
NOTCH4Q99466 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NOTCH4Q99466 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.44■□□□□ 0.54
NOTCH4Q99466 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.44■□□□□ 0.54
NOTCH4Q99466 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.44■□□□□ 0.54
NOTCH4Q99466 AC103564.2-201ENST00000432853 1299 ntBASIC18.44■□□□□ 0.54
NOTCH4Q99466 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NOTCH4Q99466 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.44■□□□□ 0.54
NOTCH4Q99466 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
NOTCH4Q99466 AC018845.2-201ENST00000568326 409 ntBASIC18.44■□□□□ 0.54
NOTCH4Q99466 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NOTCH4Q99466 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NOTCH4Q99466 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.44■□□□□ 0.54
NOTCH4Q99466 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.44■□□□□ 0.54
NOTCH4Q99466 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.44■□□□□ 0.54
NOTCH4Q99466 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
NOTCH4Q99466 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NOTCH4Q99466 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NOTCH4Q99466 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.44■□□□□ 0.54
NOTCH4Q99466 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NOTCH4Q99466 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NOTCH4Q99466 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NOTCH4Q99466 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NOTCH4Q99466 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.44■□□□□ 0.54
NOTCH4Q99466 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.44■□□□□ 0.54
NOTCH4Q99466 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NOTCH4Q99466 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NOTCH4Q99466 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.43■□□□□ 0.54
NOTCH4Q99466 AC002310.6-201ENST00000624451 1377 ntBASIC18.43■□□□□ 0.54
NOTCH4Q99466 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NOTCH4Q99466 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.43■□□□□ 0.54
NOTCH4Q99466 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NOTCH4Q99466 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
NOTCH4Q99466 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.43■□□□□ 0.54
NOTCH4Q99466 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.43■□□□□ 0.54
NOTCH4Q99466 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NOTCH4Q99466 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.43■□□□□ 0.54
NOTCH4Q99466 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms