Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trex1Q91XB0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trex1Q91XB0 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trex1Q91XB0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trex1Q91XB0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trex1Q91XB0 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trex1Q91XB0 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trex1Q91XB0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trex1Q91XB0 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trex1Q91XB0 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.25■□□□□ 0.35
Trex1Q91XB0 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trex1Q91XB0 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trex1Q91XB0 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trex1Q91XB0 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trex1Q91XB0 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.25■□□□□ 0.35
Trex1Q91XB0 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trex1Q91XB0 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.25■□□□□ 0.35
Trex1Q91XB0 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.25■□□□□ 0.35
Trex1Q91XB0 Gm17837-201ENSMUST00000186435 985 ntBASIC17.25■□□□□ 0.35
Trex1Q91XB0 Gm18049-201ENSMUST00000208909 581 ntBASIC17.25■□□□□ 0.35
Trex1Q91XB0 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.25■□□□□ 0.35
Trex1Q91XB0 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trex1Q91XB0 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trex1Q91XB0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trex1Q91XB0 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.25■□□□□ 0.35
Trex1Q91XB0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trex1Q91XB0 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trex1Q91XB0 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trex1Q91XB0 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trex1Q91XB0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trex1Q91XB0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.24■□□□□ 0.35
Trex1Q91XB0 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trex1Q91XB0 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trex1Q91XB0 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trex1Q91XB0 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trex1Q91XB0 Gm8410-201ENSMUST00000117225 605 ntBASIC17.24■□□□□ 0.35
Trex1Q91XB0 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trex1Q91XB0 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trex1Q91XB0 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.24■□□□□ 0.35
Trex1Q91XB0 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trex1Q91XB0 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trex1Q91XB0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trex1Q91XB0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trex1Q91XB0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trex1Q91XB0 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trex1Q91XB0 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trex1Q91XB0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trex1Q91XB0 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Trex1Q91XB0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.24■□□□□ 0.35
Trex1Q91XB0 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trex1Q91XB0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trex1Q91XB0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trex1Q91XB0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trex1Q91XB0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trex1Q91XB0 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trex1Q91XB0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trex1Q91XB0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trex1Q91XB0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trex1Q91XB0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trex1Q91XB0 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trex1Q91XB0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trex1Q91XB0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trex1Q91XB0 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trex1Q91XB0 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trex1Q91XB0 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trex1Q91XB0 Gm12428-201ENSMUST00000119844 727 ntBASIC17.23■□□□□ 0.35
Trex1Q91XB0 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trex1Q91XB0 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Trex1Q91XB0 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trex1Q91XB0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trex1Q91XB0 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trex1Q91XB0 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trex1Q91XB0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trex1Q91XB0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
Trex1Q91XB0 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trex1Q91XB0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Trex1Q91XB0 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Trex1Q91XB0 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trex1Q91XB0 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trex1Q91XB0 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.22■□□□□ 0.35
Trex1Q91XB0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trex1Q91XB0 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trex1Q91XB0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.22■□□□□ 0.35
Trex1Q91XB0 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.22■□□□□ 0.35
Trex1Q91XB0 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trex1Q91XB0 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms