Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.76■□□□□ 0.27
Ddx39aQ8VDW0 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx39aQ8VDW0 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx39aQ8VDW0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx39aQ8VDW0 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Ddx39aQ8VDW0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Ddx39aQ8VDW0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx39aQ8VDW0 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ddx39aQ8VDW0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx39aQ8VDW0 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx39aQ8VDW0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx39aQ8VDW0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx39aQ8VDW0 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx39aQ8VDW0 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx39aQ8VDW0 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.75■□□□□ 0.27
Ddx39aQ8VDW0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx39aQ8VDW0 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx39aQ8VDW0 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Ddx39aQ8VDW0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.75■□□□□ 0.27
Ddx39aQ8VDW0 Gm25948-201ENSMUST00000175334 112 ntBASIC16.75■□□□□ 0.27
Ddx39aQ8VDW0 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.75■□□□□ 0.27
Ddx39aQ8VDW0 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx39aQ8VDW0 Gm44872-201ENSMUST00000207864 420 ntBASIC16.75■□□□□ 0.27
Ddx39aQ8VDW0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.75■□□□□ 0.27
Ddx39aQ8VDW0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx39aQ8VDW0 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx39aQ8VDW0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.75■□□□□ 0.27
Ddx39aQ8VDW0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx39aQ8VDW0 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx39aQ8VDW0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx39aQ8VDW0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx39aQ8VDW0 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx39aQ8VDW0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx39aQ8VDW0 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Ddx39aQ8VDW0 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx39aQ8VDW0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ddx39aQ8VDW0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx39aQ8VDW0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx39aQ8VDW0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ddx39aQ8VDW0 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx39aQ8VDW0 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Ddx39aQ8VDW0 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx39aQ8VDW0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx39aQ8VDW0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx39aQ8VDW0 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.74■□□□□ 0.27
Ddx39aQ8VDW0 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.74■□□□□ 0.27
Ddx39aQ8VDW0 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.74■□□□□ 0.27
Ddx39aQ8VDW0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ddx39aQ8VDW0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx39aQ8VDW0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx39aQ8VDW0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx39aQ8VDW0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx39aQ8VDW0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx39aQ8VDW0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx39aQ8VDW0 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx39aQ8VDW0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx39aQ8VDW0 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx39aQ8VDW0 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx39aQ8VDW0 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.73■□□□□ 0.27
Ddx39aQ8VDW0 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx39aQ8VDW0 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx39aQ8VDW0 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx39aQ8VDW0 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx39aQ8VDW0 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.73■□□□□ 0.27
Ddx39aQ8VDW0 Gm6973-201ENSMUST00000117080 721 ntBASIC16.73■□□□□ 0.27
Ddx39aQ8VDW0 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.73■□□□□ 0.27
Ddx39aQ8VDW0 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx39aQ8VDW0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx39aQ8VDW0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ddx39aQ8VDW0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx39aQ8VDW0 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Ddx39aQ8VDW0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Ddx39aQ8VDW0 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx39aQ8VDW0 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx39aQ8VDW0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ddx39aQ8VDW0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ddx39aQ8VDW0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx39aQ8VDW0 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx39aQ8VDW0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx39aQ8VDW0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx39aQ8VDW0 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx39aQ8VDW0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Ddx39aQ8VDW0 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx39aQ8VDW0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx39aQ8VDW0 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx39aQ8VDW0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx39aQ8VDW0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Ddx39aQ8VDW0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.72■□□□□ 0.27
Ddx39aQ8VDW0 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Ddx39aQ8VDW0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.72■□□□□ 0.27
Ddx39aQ8VDW0 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.72■□□□□ 0.27
Ddx39aQ8VDW0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.72■□□□□ 0.27
Ddx39aQ8VDW0 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx39aQ8VDW0 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx39aQ8VDW0 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ddx39aQ8VDW0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx39aQ8VDW0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx39aQ8VDW0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx39aQ8VDW0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.72■□□□□ 0.27
Ddx39aQ8VDW0 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms