Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.73■□□□□ 0.27
Trim47Q8C0E3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.73■□□□□ 0.27
Trim47Q8C0E3 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim47Q8C0E3 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim47Q8C0E3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trim47Q8C0E3 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim47Q8C0E3 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim47Q8C0E3 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim47Q8C0E3 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim47Q8C0E3 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Trim47Q8C0E3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim47Q8C0E3 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim47Q8C0E3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trim47Q8C0E3 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trim47Q8C0E3 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim47Q8C0E3 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim47Q8C0E3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim47Q8C0E3 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim47Q8C0E3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim47Q8C0E3 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim47Q8C0E3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim47Q8C0E3 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Trim47Q8C0E3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim47Q8C0E3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim47Q8C0E3 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
Trim47Q8C0E3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Trim47Q8C0E3 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trim47Q8C0E3 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim47Q8C0E3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim47Q8C0E3 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim47Q8C0E3 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim47Q8C0E3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim47Q8C0E3 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim47Q8C0E3 Asic1-205ENSMUST00000228185 1818 ntBASIC16.72■□□□□ 0.27
Trim47Q8C0E3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim47Q8C0E3 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim47Q8C0E3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim47Q8C0E3 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.72■□□□□ 0.27
Trim47Q8C0E3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim47Q8C0E3 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim47Q8C0E3 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim47Q8C0E3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim47Q8C0E3 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trim47Q8C0E3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim47Q8C0E3 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim47Q8C0E3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Trim47Q8C0E3 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.71■□□□□ 0.27
Trim47Q8C0E3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim47Q8C0E3 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim47Q8C0E3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.71■□□□□ 0.27
Trim47Q8C0E3 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.71■□□□□ 0.27
Trim47Q8C0E3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim47Q8C0E3 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim47Q8C0E3 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim47Q8C0E3 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim47Q8C0E3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim47Q8C0E3 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trim47Q8C0E3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim47Q8C0E3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim47Q8C0E3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.71■□□□□ 0.27
Trim47Q8C0E3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim47Q8C0E3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim47Q8C0E3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim47Q8C0E3 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.7■□□□□ 0.26
Trim47Q8C0E3 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim47Q8C0E3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trim47Q8C0E3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim47Q8C0E3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim47Q8C0E3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim47Q8C0E3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Trim47Q8C0E3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim47Q8C0E3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim47Q8C0E3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.7■□□□□ 0.26
Trim47Q8C0E3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim47Q8C0E3 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim47Q8C0E3 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim47Q8C0E3 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.7■□□□□ 0.26
Trim47Q8C0E3 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim47Q8C0E3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.7■□□□□ 0.26
Trim47Q8C0E3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim47Q8C0E3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.7■□□□□ 0.26
Trim47Q8C0E3 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trim47Q8C0E3 Chchd1-203ENSMUST00000224633 557 ntBASIC16.7■□□□□ 0.26
Trim47Q8C0E3 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.7■□□□□ 0.26
Trim47Q8C0E3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim47Q8C0E3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim47Q8C0E3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim47Q8C0E3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim47Q8C0E3 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trim47Q8C0E3 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trim47Q8C0E3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim47Q8C0E3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim47Q8C0E3 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trim47Q8C0E3 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim47Q8C0E3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim47Q8C0E3 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.69■□□□□ 0.26
Trim47Q8C0E3 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trim47Q8C0E3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.69■□□□□ 0.26
Trim47Q8C0E3 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.69■□□□□ 0.26
Trim47Q8C0E3 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms