Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn3bQ8BHK2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Scn3bQ8BHK2 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn3bQ8BHK2 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn3bQ8BHK2 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.07□□□□□ -0.16
Scn3bQ8BHK2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Scn3bQ8BHK2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3bQ8BHK2 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3bQ8BHK2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3bQ8BHK2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3bQ8BHK2 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3bQ8BHK2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3bQ8BHK2 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3bQ8BHK2 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3bQ8BHK2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3bQ8BHK2 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3bQ8BHK2 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3bQ8BHK2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3bQ8BHK2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3bQ8BHK2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3bQ8BHK2 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.05□□□□□ -0.16
Scn3bQ8BHK2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.05□□□□□ -0.16
Scn3bQ8BHK2 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.05□□□□□ -0.16
Scn3bQ8BHK2 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3bQ8BHK2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Scn3bQ8BHK2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3bQ8BHK2 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3bQ8BHK2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3bQ8BHK2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3bQ8BHK2 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3bQ8BHK2 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3bQ8BHK2 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3bQ8BHK2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3bQ8BHK2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3bQ8BHK2 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3bQ8BHK2 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3bQ8BHK2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3bQ8BHK2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3bQ8BHK2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3bQ8BHK2 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3bQ8BHK2 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3bQ8BHK2 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.04□□□□□ -0.16
Scn3bQ8BHK2 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3bQ8BHK2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3bQ8BHK2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.04□□□□□ -0.16
Scn3bQ8BHK2 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3bQ8BHK2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3bQ8BHK2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Scn3bQ8BHK2 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Scn3bQ8BHK2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3bQ8BHK2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3bQ8BHK2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3bQ8BHK2 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Scn3bQ8BHK2 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3bQ8BHK2 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3bQ8BHK2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Scn3bQ8BHK2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3bQ8BHK2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.04□□□□□ -0.16
Scn3bQ8BHK2 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3bQ8BHK2 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3bQ8BHK2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn3bQ8BHK2 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn3bQ8BHK2 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn3bQ8BHK2 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn3bQ8BHK2 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn3bQ8BHK2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn3bQ8BHK2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn3bQ8BHK2 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.03□□□□□ -0.16
Scn3bQ8BHK2 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn3bQ8BHK2 Gm11355-201ENSMUST00000121120 306 ntBASIC14.03□□□□□ -0.16
Scn3bQ8BHK2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms