Protein–RNA interactions for Protein: Q62177

Sema3b, Semaphorin-3B, mousemouse

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3bQ62177 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sema3bQ62177 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sema3bQ62177 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sema3bQ62177 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sema3bQ62177 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sema3bQ62177 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sema3bQ62177 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sema3bQ62177 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sema3bQ62177 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sema3bQ62177 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sema3bQ62177 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.4□□□□□ -0.1
Sema3bQ62177 Gm22175-201ENSMUST00000175007 78 ntBASIC14.4□□□□□ -0.1
Sema3bQ62177 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sema3bQ62177 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.4□□□□□ -0.1
Sema3bQ62177 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.4□□□□□ -0.1
Sema3bQ62177 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sema3bQ62177 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sema3bQ62177 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.4□□□□□ -0.1
Sema3bQ62177 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sema3bQ62177 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sema3bQ62177 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sema3bQ62177 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sema3bQ62177 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sema3bQ62177 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sema3bQ62177 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sema3bQ62177 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema3bQ62177 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Sema3bQ62177 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sema3bQ62177 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema3bQ62177 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sema3bQ62177 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema3bQ62177 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema3bQ62177 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema3bQ62177 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sema3bQ62177 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sema3bQ62177 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema3bQ62177 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.39□□□□□ -0.11
Sema3bQ62177 Gm43125-201ENSMUST00000201724 730 ntBASIC14.39□□□□□ -0.11
Sema3bQ62177 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.39□□□□□ -0.11
Sema3bQ62177 Gm19164-201ENSMUST00000210667 640 ntBASIC14.39□□□□□ -0.11
Sema3bQ62177 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.39□□□□□ -0.11
Sema3bQ62177 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
Sema3bQ62177 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.39□□□□□ -0.11
Sema3bQ62177 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema3bQ62177 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema3bQ62177 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sema3bQ62177 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema3bQ62177 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema3bQ62177 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema3bQ62177 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema3bQ62177 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema3bQ62177 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema3bQ62177 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema3bQ62177 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.39□□□□□ -0.11
Sema3bQ62177 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema3bQ62177 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema3bQ62177 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.38□□□□□ -0.11
Sema3bQ62177 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema3bQ62177 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sema3bQ62177 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema3bQ62177 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema3bQ62177 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Sema3bQ62177 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.38□□□□□ -0.11
Sema3bQ62177 Mir449b-201ENSMUST00000104833 80 ntBASIC14.38□□□□□ -0.11
Sema3bQ62177 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema3bQ62177 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.38□□□□□ -0.11
Sema3bQ62177 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sema3bQ62177 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema3bQ62177 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema3bQ62177 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema3bQ62177 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema3bQ62177 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema3bQ62177 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema3bQ62177 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema3bQ62177 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.38□□□□□ -0.11
Sema3bQ62177 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema3bQ62177 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sema3bQ62177 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Sema3bQ62177 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sema3bQ62177 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema3bQ62177 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Sema3bQ62177 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sema3bQ62177 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sema3bQ62177 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Sema3bQ62177 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sema3bQ62177 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sema3bQ62177 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sema3bQ62177 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sema3bQ62177 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.37□□□□□ -0.11
Sema3bQ62177 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sema3bQ62177 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.37□□□□□ -0.11
Sema3bQ62177 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sema3bQ62177 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.37□□□□□ -0.11
Sema3bQ62177 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.37□□□□□ -0.11
Sema3bQ62177 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sema3bQ62177 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sema3bQ62177 Gm20553-201ENSMUST00000204205 844 ntBASIC14.37□□□□□ -0.11
Sema3bQ62177 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.37□□□□□ -0.11
Sema3bQ62177 Thap2-203ENSMUST00000218989 527 ntBASIC14.37□□□□□ -0.11
Sema3bQ62177 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms