Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Gm23935-201ENSMUST00000102303 57 ntBASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Gm24270-201ENSMUST00000102326 57 ntBASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Gm16198-201ENSMUST00000118766 670 ntBASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Gm24245-201ENSMUST00000157318 57 ntBASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Gm10154-201ENSMUST00000084445 354 ntBASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-4Q5R1I0 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms