Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.53■□□□□ 0.24
Sox5P35710 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.53■□□□□ 0.24
Sox5P35710 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
Sox5P35710 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox5P35710 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox5P35710 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Sox5P35710 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox5P35710 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Sox5P35710 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox5P35710 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox5P35710 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sox5P35710 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox5P35710 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox5P35710 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Sox5P35710 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.52■□□□□ 0.24
Sox5P35710 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox5P35710 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox5P35710 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox5P35710 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sox5P35710 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.52■□□□□ 0.23
Sox5P35710 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.52■□□□□ 0.23
Sox5P35710 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sox5P35710 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sox5P35710 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sox5P35710 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox5P35710 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox5P35710 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.51■□□□□ 0.23
Sox5P35710 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox5P35710 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sox5P35710 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sox5P35710 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sox5P35710 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox5P35710 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox5P35710 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox5P35710 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.51■□□□□ 0.23
Sox5P35710 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Sox5P35710 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sox5P35710 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sox5P35710 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.51■□□□□ 0.23
Sox5P35710 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.51■□□□□ 0.23
Sox5P35710 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox5P35710 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox5P35710 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox5P35710 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Sox5P35710 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sox5P35710 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox5P35710 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox5P35710 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.51■□□□□ 0.23
Sox5P35710 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sox5P35710 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox5P35710 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Sox5P35710 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox5P35710 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox5P35710 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox5P35710 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox5P35710 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox5P35710 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox5P35710 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox5P35710 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox5P35710 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sox5P35710 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sox5P35710 Gm27357-201ENSMUST00000183754 135 ntBASIC16.5■□□□□ 0.23
Sox5P35710 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox5P35710 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox5P35710 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox5P35710 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox5P35710 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sox5P35710 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox5P35710 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox5P35710 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox5P35710 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Sox5P35710 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox5P35710 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.5■□□□□ 0.23
Sox5P35710 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox5P35710 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox5P35710 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox5P35710 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox5P35710 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Sox5P35710 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sox5P35710 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox5P35710 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox5P35710 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox5P35710 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.49■□□□□ 0.23
Sox5P35710 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Sox5P35710 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sox5P35710 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox5P35710 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Sox5P35710 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.49■□□□□ 0.23
Sox5P35710 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Sox5P35710 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox5P35710 Gm23547-201ENSMUST00000158210 271 ntBASIC16.49■□□□□ 0.23
Sox5P35710 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sox5P35710 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Sox5P35710 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.49■□□□□ 0.23
Sox5P35710 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Sox5P35710 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sox5P35710 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sox5P35710 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sox5P35710 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Sox5P35710 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms