Protein–RNA interactions for Protein: P12399

Ctla2a, Protein CTLA-2-alpha, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2aP12399 Carlr-201ENSMUST00000181515 2574 ntBASIC13.65□□□□□ -0.22
Ctla2aP12399 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Ctla2aP12399 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctla2aP12399 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctla2aP12399 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ctla2aP12399 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ctla2aP12399 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctla2aP12399 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ctla2aP12399 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.64□□□□□ -0.23
Ctla2aP12399 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctla2aP12399 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctla2aP12399 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctla2aP12399 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.64□□□□□ -0.23
Ctla2aP12399 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.64□□□□□ -0.23
Ctla2aP12399 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.64□□□□□ -0.23
Ctla2aP12399 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctla2aP12399 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ctla2aP12399 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctla2aP12399 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctla2aP12399 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ctla2aP12399 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctla2aP12399 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctla2aP12399 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.64□□□□□ -0.23
Ctla2aP12399 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctla2aP12399 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ctla2aP12399 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ctla2aP12399 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctla2aP12399 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ctla2aP12399 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctla2aP12399 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ctla2aP12399 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
Ctla2aP12399 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctla2aP12399 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctla2aP12399 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctla2aP12399 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ctla2aP12399 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ctla2aP12399 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.63□□□□□ -0.23
Ctla2aP12399 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ctla2aP12399 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ctla2aP12399 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.63□□□□□ -0.23
Ctla2aP12399 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Ctla2aP12399 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.63□□□□□ -0.23
Ctla2aP12399 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ctla2aP12399 Gm8520-201ENSMUST00000186517 868 ntBASIC13.63□□□□□ -0.23
Ctla2aP12399 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.63□□□□□ -0.23
Ctla2aP12399 Gm3375-201ENSMUST00000203929 796 ntBASIC13.63□□□□□ -0.23
Ctla2aP12399 Gm7370-201ENSMUST00000219471 767 ntBASIC13.63□□□□□ -0.23
Ctla2aP12399 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctla2aP12399 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.63□□□□□ -0.23
Ctla2aP12399 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctla2aP12399 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ctla2aP12399 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctla2aP12399 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctla2aP12399 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctla2aP12399 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctla2aP12399 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctla2aP12399 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctla2aP12399 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ctla2aP12399 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Ctla2aP12399 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ctla2aP12399 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctla2aP12399 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ctla2aP12399 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ctla2aP12399 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ctla2aP12399 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ctla2aP12399 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.62□□□□□ -0.23
Ctla2aP12399 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ctla2aP12399 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.62□□□□□ -0.23
Ctla2aP12399 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ctla2aP12399 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ctla2aP12399 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ctla2aP12399 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.62□□□□□ -0.23
Ctla2aP12399 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ctla2aP12399 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ctla2aP12399 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ctla2aP12399 Gm715-201ENSMUST00000117865 831 ntBASIC13.62□□□□□ -0.23
Ctla2aP12399 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.62□□□□□ -0.23
Ctla2aP12399 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.62□□□□□ -0.23
Ctla2aP12399 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ctla2aP12399 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ctla2aP12399 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ctla2aP12399 Gm10566-201ENSMUST00000086739 996 ntBASIC13.62□□□□□ -0.23
Ctla2aP12399 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ctla2aP12399 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ctla2aP12399 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ctla2aP12399 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ctla2aP12399 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.62□□□□□ -0.23
Ctla2aP12399 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ctla2aP12399 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ctla2aP12399 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ctla2aP12399 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Ctla2aP12399 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ctla2aP12399 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ctla2aP12399 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ctla2aP12399 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.62□□□□□ -0.23
Ctla2aP12399 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ctla2aP12399 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ctla2aP12399 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ctla2aP12399 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ctla2aP12399 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 110.5 ms