Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CTSDP07339 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CTSDP07339 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CTSDP07339 AC036111.1-201ENST00000533973 1582 ntBASIC14.99□□□□□ -0.01
CTSDP07339 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CTSDP07339 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CTSDP07339 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.99□□□□□ -0.01
CTSDP07339 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CTSDP07339 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.99□□□□□ -0.01
CTSDP07339 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CTSDP07339 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CTSDP07339 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CTSDP07339 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.99□□□□□ -0.01
CTSDP07339 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
CTSDP07339 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.99□□□□□ -0.01
CTSDP07339 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CTSDP07339 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.99□□□□□ -0.01
CTSDP07339 MIR3180-5-201ENST00000583743 153 ntBASIC14.99□□□□□ -0.01
CTSDP07339 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CTSDP07339 AC124016.1-201ENST00000609552 612 ntBASIC14.99□□□□□ -0.01
CTSDP07339 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
CTSDP07339 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CTSDP07339 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CTSDP07339 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CTSDP07339 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CTSDP07339 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.99□□□□□ -0.01
CTSDP07339 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CTSDP07339 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CTSDP07339 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CTSDP07339 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CTSDP07339 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CTSDP07339 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CTSDP07339 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
CTSDP07339 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.99□□□□□ -0.01
CTSDP07339 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.99□□□□□ -0.01
CTSDP07339 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CTSDP07339 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSDP07339 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.98□□□□□ -0.01
CTSDP07339 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CTSDP07339 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSDP07339 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSDP07339 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.98□□□□□ -0.01
CTSDP07339 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSDP07339 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CTSDP07339 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CTSDP07339 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.98□□□□□ -0.01
CTSDP07339 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CTSDP07339 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.98□□□□□ -0.01
CTSDP07339 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSDP07339 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSDP07339 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSDP07339 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CTSDP07339 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.98□□□□□ -0.01
CTSDP07339 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CTSDP07339 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSDP07339 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.98□□□□□ -0.01
CTSDP07339 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSDP07339 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSDP07339 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSDP07339 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.98□□□□□ -0.01
CTSDP07339 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSDP07339 CD99P1-205ENST00000527459 561 ntBASIC14.98□□□□□ -0.01
CTSDP07339 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CTSDP07339 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.98□□□□□ -0.01
CTSDP07339 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSDP07339 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CTSDP07339 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSDP07339 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.98□□□□□ -0.01
CTSDP07339 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSDP07339 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSDP07339 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CTSDP07339 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSDP07339 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.98□□□□□ -0.01
CTSDP07339 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSDP07339 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSDP07339 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.98□□□□□ -0.01
CTSDP07339 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSDP07339 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CTSDP07339 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CTSDP07339 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSDP07339 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSDP07339 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.97□□□□□ -0.01
CTSDP07339 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CTSDP07339 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSDP07339 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CTSDP07339 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.97□□□□□ -0.01
CTSDP07339 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
CTSDP07339 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSDP07339 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.97□□□□□ -0.01
CTSDP07339 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSDP07339 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSDP07339 AL353807.1-201ENST00000427475 662 ntBASIC14.97□□□□□ -0.01
CTSDP07339 AC011506.1-201ENST00000474329 610 ntBASIC14.97□□□□□ -0.01
CTSDP07339 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.97□□□□□ -0.01
CTSDP07339 AC026366.1-201ENST00000488803 879 ntBASIC14.97□□□□□ -0.01
CTSDP07339 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.97□□□□□ -0.01
CTSDP07339 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.97□□□□□ -0.01
CTSDP07339 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CTSDP07339 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSDP07339 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms