Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC011840.4-201ENST00000578471 627 ntBASIC16.86■□□□□ 0.29
PDGFAP04085 AC064862.7-201ENST00000604520 867 ntBASIC16.86■□□□□ 0.29
PDGFAP04085 AC117500.6-201ENST00000624871 588 ntBASIC16.86■□□□□ 0.29
PDGFAP04085 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PDGFAP04085 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.86■□□□□ 0.29
PDGFAP04085 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFAP04085 AL139384.1-201ENST00000612143 3047 ntBASIC16.86■□□□□ 0.29
PDGFAP04085 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFAP04085 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFAP04085 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFAP04085 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.86■□□□□ 0.29
PDGFAP04085 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PDGFAP04085 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.86■□□□□ 0.29
PDGFAP04085 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.86■□□□□ 0.29
PDGFAP04085 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFAP04085 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFAP04085 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.86■□□□□ 0.29
PDGFAP04085 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFAP04085 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
PDGFAP04085 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
PDGFAP04085 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFAP04085 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFAP04085 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFAP04085 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFAP04085 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PDGFAP04085 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.85■□□□□ 0.29
PDGFAP04085 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFAP04085 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFAP04085 AC099398.1-201ENST00000567919 2776 ntBASIC16.85■□□□□ 0.29
PDGFAP04085 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PDGFAP04085 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFAP04085 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFAP04085 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFAP04085 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFAP04085 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PDGFAP04085 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFAP04085 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.85■□□□□ 0.29
PDGFAP04085 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PDGFAP04085 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.85■□□□□ 0.29
PDGFAP04085 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFAP04085 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFAP04085 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.85■□□□□ 0.29
PDGFAP04085 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.85■□□□□ 0.29
PDGFAP04085 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.85■□□□□ 0.29
PDGFAP04085 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.85■□□□□ 0.29
PDGFAP04085 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.85■□□□□ 0.29
PDGFAP04085 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFAP04085 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PDGFAP04085 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFAP04085 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFAP04085 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFAP04085 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.85■□□□□ 0.29
PDGFAP04085 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFAP04085 AL390961.4-201ENST00000623958 2535 ntBASIC16.85■□□□□ 0.29
PDGFAP04085 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.84■□□□□ 0.29
PDGFAP04085 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFAP04085 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.84■□□□□ 0.29
PDGFAP04085 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFAP04085 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PDGFAP04085 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFAP04085 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.84■□□□□ 0.29
PDGFAP04085 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.84■□□□□ 0.29
PDGFAP04085 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFAP04085 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFAP04085 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFAP04085 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFAP04085 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.84■□□□□ 0.29
PDGFAP04085 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFAP04085 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFAP04085 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFAP04085 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.84■□□□□ 0.29
PDGFAP04085 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PDGFAP04085 KRT18P67-201ENST00000432816 1264 ntBASIC16.84■□□□□ 0.29
PDGFAP04085 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.84■□□□□ 0.29
PDGFAP04085 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFAP04085 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.84■□□□□ 0.29
PDGFAP04085 MIR5100-201ENST00000579544 119 ntBASIC16.84■□□□□ 0.29
PDGFAP04085 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFAP04085 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PDGFAP04085 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.84■□□□□ 0.29
PDGFAP04085 AC068587.9-201ENST00000641814 219 ntBASIC16.84■□□□□ 0.29
PDGFAP04085 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFAP04085 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.84■□□□□ 0.29
PDGFAP04085 AC243591.1-201ENST00000452967 1364 ntBASIC16.84■□□□□ 0.29
PDGFAP04085 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.84■□□□□ 0.29
PDGFAP04085 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFAP04085 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFAP04085 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PDGFAP04085 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFAP04085 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.84■□□□□ 0.29
PDGFAP04085 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.84■□□□□ 0.29
PDGFAP04085 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFAP04085 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.84■□□□□ 0.29
PDGFAP04085 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PDGFAP04085 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PDGFAP04085 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PDGFAP04085 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
PDGFAP04085 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PDGFAP04085 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
PDGFAP04085 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms