Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm16061-201ENSMUST00000122167 857 ntBASIC11.07□□□□□ -0.64
TcraP01849 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC11.07□□□□□ -0.64
TcraP01849 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC11.07□□□□□ -0.64
TcraP01849 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC11.07□□□□□ -0.64
TcraP01849 AC159205.6-201ENSMUST00000224935 887 ntBASIC11.07□□□□□ -0.64
TcraP01849 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.07□□□□□ -0.64
TcraP01849 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
TcraP01849 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
TcraP01849 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
TcraP01849 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
TcraP01849 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TcraP01849 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TcraP01849 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TcraP01849 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TcraP01849 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TcraP01849 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
TcraP01849 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TcraP01849 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
TcraP01849 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TcraP01849 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TcraP01849 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TcraP01849 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TcraP01849 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
TcraP01849 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
TcraP01849 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.06□□□□□ -0.64
TcraP01849 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TcraP01849 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
TcraP01849 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
TcraP01849 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
TcraP01849 Gm44450-201ENSMUST00000199528 114 ntBASIC11.06□□□□□ -0.64
TcraP01849 Gm18421-201ENSMUST00000204122 625 ntBASIC11.06□□□□□ -0.64
TcraP01849 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TcraP01849 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TcraP01849 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TcraP01849 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
TcraP01849 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC11.06□□□□□ -0.64
TcraP01849 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.06□□□□□ -0.64
TcraP01849 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TcraP01849 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TcraP01849 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
TcraP01849 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TcraP01849 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TcraP01849 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
TcraP01849 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TcraP01849 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TcraP01849 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TcraP01849 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
TcraP01849 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
TcraP01849 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TcraP01849 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TcraP01849 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TcraP01849 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
TcraP01849 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
TcraP01849 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TcraP01849 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TcraP01849 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC11.05□□□□□ -0.64
TcraP01849 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.05□□□□□ -0.64
TcraP01849 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
TcraP01849 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TcraP01849 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TcraP01849 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TcraP01849 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TcraP01849 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
TcraP01849 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TcraP01849 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
TcraP01849 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
TcraP01849 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TcraP01849 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
TcraP01849 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TcraP01849 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TcraP01849 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
TcraP01849 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
TcraP01849 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
TcraP01849 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TcraP01849 Gm15442-201ENSMUST00000117905 1527 ntBASIC11.04□□□□□ -0.64
TcraP01849 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
TcraP01849 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TcraP01849 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC11.04□□□□□ -0.64
TcraP01849 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
TcraP01849 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC11.04□□□□□ -0.64
TcraP01849 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
TcraP01849 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
TcraP01849 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms