Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Trav8-1A0A075B641 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Gm38027-201ENSMUST00000192315 235 ntBASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Gm43364-201ENSMUST00000196046 3274 ntBASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav8-1A0A075B641 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 Zfp264-201ENSMUST00000208656 1563 ntBASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 AC164629.5-201ENSMUST00000220387 632 ntBASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav8-1A0A075B641 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 Gm7712-202ENSMUST00000222331 1510 ntBASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms