Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.72■□□□□ 0.43
Ccdc7Q9D541 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc7Q9D541 Birc2-201ENSMUST00000054878 378 ntBASIC17.72■□□□□ 0.43
Ccdc7Q9D541 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc7Q9D541 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.72■□□□□ 0.43
Ccdc7Q9D541 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc7Q9D541 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc7Q9D541 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc7Q9D541 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc7Q9D541 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc7Q9D541 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.72■□□□□ 0.43
Ccdc7Q9D541 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc7Q9D541 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc7Q9D541 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc7Q9D541 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc7Q9D541 Sybu-209ENSMUST00000228639 4113 ntBASIC17.71■□□□□ 0.43
Ccdc7Q9D541 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc7Q9D541 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc7Q9D541 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc7Q9D541 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc7Q9D541 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.71■□□□□ 0.43
Ccdc7Q9D541 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.71■□□□□ 0.43
Ccdc7Q9D541 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.71■□□□□ 0.43
Ccdc7Q9D541 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.71■□□□□ 0.43
Ccdc7Q9D541 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.71■□□□□ 0.43
Ccdc7Q9D541 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ccdc7Q9D541 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc7Q9D541 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc7Q9D541 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc7Q9D541 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc7Q9D541 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ccdc7Q9D541 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.71■□□□□ 0.42
Ccdc7Q9D541 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ccdc7Q9D541 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.71■□□□□ 0.42
Ccdc7Q9D541 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc7Q9D541 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc7Q9D541 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc7Q9D541 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc7Q9D541 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc7Q9D541 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc7Q9D541 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc7Q9D541 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc7Q9D541 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Ccdc7Q9D541 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc7Q9D541 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc7Q9D541 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ccdc7Q9D541 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc7Q9D541 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc7Q9D541 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ccdc7Q9D541 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc7Q9D541 Gm27459-201ENSMUST00000184860 107 ntBASIC17.69■□□□□ 0.42
Ccdc7Q9D541 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.69■□□□□ 0.42
Ccdc7Q9D541 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.69■□□□□ 0.42
Ccdc7Q9D541 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.69■□□□□ 0.42
Ccdc7Q9D541 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc7Q9D541 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ccdc7Q9D541 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc7Q9D541 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc7Q9D541 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc7Q9D541 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc7Q9D541 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc7Q9D541 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc7Q9D541 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.68■□□□□ 0.42
Ccdc7Q9D541 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc7Q9D541 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc7Q9D541 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc7Q9D541 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc7Q9D541 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc7Q9D541 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc7Q9D541 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms