Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lysmd3Q99LE3 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lysmd3Q99LE3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Lysmd3Q99LE3 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lysmd3Q99LE3 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lysmd3Q99LE3 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lysmd3Q99LE3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lysmd3Q99LE3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lysmd3Q99LE3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.7■□□□□ 0.1
Lysmd3Q99LE3 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lysmd3Q99LE3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.7■□□□□ 0.1
Lysmd3Q99LE3 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lysmd3Q99LE3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.7■□□□□ 0.1
Lysmd3Q99LE3 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Lysmd3Q99LE3 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lysmd3Q99LE3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lysmd3Q99LE3 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lysmd3Q99LE3 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.7■□□□□ 0.1
Lysmd3Q99LE3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lysmd3Q99LE3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.7■□□□□ 0.1
Lysmd3Q99LE3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Lysmd3Q99LE3 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lysmd3Q99LE3 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lysmd3Q99LE3 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.7■□□□□ 0.1
Lysmd3Q99LE3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Lysmd3Q99LE3 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lysmd3Q99LE3 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lysmd3Q99LE3 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.7■□□□□ 0.1
Lysmd3Q99LE3 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd3Q99LE3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd3Q99LE3 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd3Q99LE3 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd3Q99LE3 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Lysmd3Q99LE3 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd3Q99LE3 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd3Q99LE3 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd3Q99LE3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Lysmd3Q99LE3 Gm15427-201ENSMUST00000117288 531 ntBASIC15.69■□□□□ 0.1
Lysmd3Q99LE3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.69■□□□□ 0.1
Lysmd3Q99LE3 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd3Q99LE3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd3Q99LE3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd3Q99LE3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Lysmd3Q99LE3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd3Q99LE3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd3Q99LE3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd3Q99LE3 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.69■□□□□ 0.1
Lysmd3Q99LE3 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd3Q99LE3 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd3Q99LE3 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd3Q99LE3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lysmd3Q99LE3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lysmd3Q99LE3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Lysmd3Q99LE3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lysmd3Q99LE3 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lysmd3Q99LE3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lysmd3Q99LE3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.68■□□□□ 0.1
Lysmd3Q99LE3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lysmd3Q99LE3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lysmd3Q99LE3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Lysmd3Q99LE3 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Lysmd3Q99LE3 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lysmd3Q99LE3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Lysmd3Q99LE3 Gm16198-201ENSMUST00000118766 670 ntBASIC15.68■□□□□ 0.1
Lysmd3Q99LE3 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.68■□□□□ 0.1
Lysmd3Q99LE3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Lysmd3Q99LE3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Lysmd3Q99LE3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lysmd3Q99LE3 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lysmd3Q99LE3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.68■□□□□ 0.1
Lysmd3Q99LE3 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lysmd3Q99LE3 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Lysmd3Q99LE3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lysmd3Q99LE3 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Lysmd3Q99LE3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lysmd3Q99LE3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lysmd3Q99LE3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lysmd3Q99LE3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd3Q99LE3 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd3Q99LE3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd3Q99LE3 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd3Q99LE3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd3Q99LE3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd3Q99LE3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd3Q99LE3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd3Q99LE3 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd3Q99LE3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd3Q99LE3 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd3Q99LE3 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd3Q99LE3 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd3Q99LE3 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd3Q99LE3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.67■□□□□ 0.1
Lysmd3Q99LE3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Lysmd3Q99LE3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd3Q99LE3 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.67■□□□□ 0.1
Lysmd3Q99LE3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd3Q99LE3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd3Q99LE3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.67■□□□□ 0.1
Lysmd3Q99LE3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd3Q99LE3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms