Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim6Q8BGE7 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim6Q8BGE7 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Gm8825-201ENSMUST00000182565 998 ntBASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Gm4518-201ENSMUST00000182638 718 ntBASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim6Q8BGE7 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.1■□□□□ 0.17
Trim6Q8BGE7 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Gm25016-201ENSMUST00000158399 131 ntBASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim6Q8BGE7 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim6Q8BGE7 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim6Q8BGE7 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim6Q8BGE7 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim6Q8BGE7 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim6Q8BGE7 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.08■□□□□ 0.17
Trim6Q8BGE7 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim6Q8BGE7 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms