Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LRRTM1Q86UE6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRTM1Q86UE6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRTM1Q86UE6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRTM1Q86UE6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRTM1Q86UE6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRTM1Q86UE6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.7■□□□□ 0.1
LRRTM1Q86UE6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRTM1Q86UE6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.7■□□□□ 0.1
LRRTM1Q86UE6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.7■□□□□ 0.1
LRRTM1Q86UE6 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRRTM1Q86UE6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRTM1Q86UE6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 AL024508.2-201ENST00000607749 1894 ntBASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 MFAP1P1-201ENST00000442257 1255 ntBASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 RARRES2P10-201ENST00000564312 460 ntBASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 OR6D1P-202ENST00000641007 5290 ntBASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRTM1Q86UE6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 AL121761.2-201ENST00000598007 1648 ntBASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 AC011676.5-201ENST00000624864 2660 ntBASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 DUTP2-201ENST00000519164 463 ntBASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 CROCCP2-202ENST00000412962 2773 ntBASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRTM1Q86UE6 AC008894.3-201ENST00000624324 3103 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms