Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Celf4-206ENSMUST00000224553 1729 ntBASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcc2Q6PDG5 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcc2Q6PDG5 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Smarcc2Q6PDG5 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcc2Q6PDG5 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.65■□□□□ 0.42
Smarcc2Q6PDG5 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcc2Q6PDG5 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcc2Q6PDG5 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcc2Q6PDG5 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcc2Q6PDG5 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.65■□□□□ 0.42
Smarcc2Q6PDG5 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.65■□□□□ 0.42
Smarcc2Q6PDG5 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcc2Q6PDG5 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcc2Q6PDG5 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Smarcc2Q6PDG5 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.65■□□□□ 0.42
Smarcc2Q6PDG5 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcc2Q6PDG5 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcc2Q6PDG5 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcc2Q6PDG5 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Smarcc2Q6PDG5 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
Smarcc2Q6PDG5 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcc2Q6PDG5 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcc2Q6PDG5 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Smarcc2Q6PDG5 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Smarcc2Q6PDG5 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Smarcc2Q6PDG5 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Smarcc2Q6PDG5 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.64■□□□□ 0.41
Smarcc2Q6PDG5 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcc2Q6PDG5 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcc2Q6PDG5 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.64■□□□□ 0.41
Smarcc2Q6PDG5 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.64■□□□□ 0.41
Smarcc2Q6PDG5 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcc2Q6PDG5 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.64■□□□□ 0.41
Smarcc2Q6PDG5 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.64■□□□□ 0.41
Smarcc2Q6PDG5 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.64■□□□□ 0.41
Smarcc2Q6PDG5 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.64■□□□□ 0.41
Smarcc2Q6PDG5 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Smarcc2Q6PDG5 Efs-202ENSMUST00000227037 2540 ntBASIC17.64■□□□□ 0.41
Smarcc2Q6PDG5 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcc2Q6PDG5 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcc2Q6PDG5 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcc2Q6PDG5 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 Gm18489-201ENSMUST00000172565 551 ntBASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 Gm45167-201ENSMUST00000208007 322 ntBASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc2Q6PDG5 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Smarcc2Q6PDG5 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcc2Q6PDG5 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcc2Q6PDG5 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcc2Q6PDG5 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcc2Q6PDG5 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Smarcc2Q6PDG5 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.62■□□□□ 0.41
Smarcc2Q6PDG5 Gm14140-201ENSMUST00000119999 995 ntBASIC17.62■□□□□ 0.41
Smarcc2Q6PDG5 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcc2Q6PDG5 Gm10499-201ENSMUST00000174094 934 ntBASIC17.62■□□□□ 0.41
Smarcc2Q6PDG5 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.62■□□□□ 0.41
Smarcc2Q6PDG5 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcc2Q6PDG5 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcc2Q6PDG5 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.62■□□□□ 0.41
Smarcc2Q6PDG5 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.62■□□□□ 0.41
Smarcc2Q6PDG5 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcc2Q6PDG5 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcc2Q6PDG5 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms