Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Abcf1Q6P542 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Abcf1Q6P542 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abcf1Q6P542 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abcf1Q6P542 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abcf1Q6P542 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Abcf1Q6P542 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abcf1Q6P542 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abcf1Q6P542 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Abcf1Q6P542 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abcf1Q6P542 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Abcf1Q6P542 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.98■□□□□ 0.31
Abcf1Q6P542 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Abcf1Q6P542 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Abcf1Q6P542 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.98■□□□□ 0.31
Abcf1Q6P542 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.98■□□□□ 0.31
Abcf1Q6P542 Gm27867-201ENSMUST00000184778 125 ntBASIC16.98■□□□□ 0.31
Abcf1Q6P542 Gm34391-201ENSMUST00000203706 907 ntBASIC16.98■□□□□ 0.31
Abcf1Q6P542 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.98■□□□□ 0.31
Abcf1Q6P542 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.98■□□□□ 0.31
Abcf1Q6P542 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.98■□□□□ 0.31
Abcf1Q6P542 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.98■□□□□ 0.31
Abcf1Q6P542 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abcf1Q6P542 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abcf1Q6P542 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abcf1Q6P542 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abcf1Q6P542 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abcf1Q6P542 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.98■□□□□ 0.31
Abcf1Q6P542 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abcf1Q6P542 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abcf1Q6P542 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Abcf1Q6P542 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Abcf1Q6P542 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Abcf1Q6P542 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Abcf1Q6P542 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Abcf1Q6P542 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Abcf1Q6P542 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Abcf1Q6P542 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Abcf1Q6P542 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Abcf1Q6P542 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.97■□□□□ 0.31
Abcf1Q6P542 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Abcf1Q6P542 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.97■□□□□ 0.31
Abcf1Q6P542 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.97■□□□□ 0.31
Abcf1Q6P542 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Abcf1Q6P542 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Abcf1Q6P542 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Abcf1Q6P542 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Abcf1Q6P542 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Abcf1Q6P542 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Abcf1Q6P542 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Abcf1Q6P542 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.97■□□□□ 0.31
Abcf1Q6P542 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Abcf1Q6P542 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Abcf1Q6P542 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Abcf1Q6P542 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Abcf1Q6P542 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.97■□□□□ 0.31
Abcf1Q6P542 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Abcf1Q6P542 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Abcf1Q6P542 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Abcf1Q6P542 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Abcf1Q6P542 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Abcf1Q6P542 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Abcf1Q6P542 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Abcf1Q6P542 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.96■□□□□ 0.31
Abcf1Q6P542 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Abcf1Q6P542 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.96■□□□□ 0.31
Abcf1Q6P542 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Abcf1Q6P542 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Abcf1Q6P542 Gm27459-201ENSMUST00000184860 107 ntBASIC16.96■□□□□ 0.31
Abcf1Q6P542 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Abcf1Q6P542 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.96■□□□□ 0.31
Abcf1Q6P542 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.96■□□□□ 0.31
Abcf1Q6P542 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Abcf1Q6P542 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Abcf1Q6P542 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Abcf1Q6P542 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Abcf1Q6P542 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Abcf1Q6P542 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Abcf1Q6P542 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Abcf1Q6P542 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Abcf1Q6P542 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Abcf1Q6P542 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Abcf1Q6P542 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Abcf1Q6P542 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Abcf1Q6P542 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Abcf1Q6P542 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Abcf1Q6P542 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Abcf1Q6P542 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Abcf1Q6P542 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Abcf1Q6P542 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Abcf1Q6P542 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Abcf1Q6P542 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Abcf1Q6P542 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Abcf1Q6P542 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.95■□□□□ 0.3
Abcf1Q6P542 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.95■□□□□ 0.3
Abcf1Q6P542 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Abcf1Q6P542 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Abcf1Q6P542 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Abcf1Q6P542 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Abcf1Q6P542 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms