Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
Scarb1Q61009 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scarb1Q61009 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scarb1Q61009 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scarb1Q61009 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scarb1Q61009 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Scarb1Q61009 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.8□□□□□ -0.36
Scarb1Q61009 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scarb1Q61009 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scarb1Q61009 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scarb1Q61009 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Scarb1Q61009 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.79□□□□□ -0.36
Scarb1Q61009 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scarb1Q61009 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scarb1Q61009 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scarb1Q61009 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scarb1Q61009 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scarb1Q61009 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Scarb1Q61009 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.79□□□□□ -0.36
Scarb1Q61009 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scarb1Q61009 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Scarb1Q61009 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scarb1Q61009 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scarb1Q61009 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scarb1Q61009 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scarb1Q61009 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Scarb1Q61009 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Scarb1Q61009 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scarb1Q61009 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scarb1Q61009 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scarb1Q61009 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scarb1Q61009 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scarb1Q61009 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Scarb1Q61009 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scarb1Q61009 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scarb1Q61009 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scarb1Q61009 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scarb1Q61009 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scarb1Q61009 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.79□□□□□ -0.36
Scarb1Q61009 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.79□□□□□ -0.36
Scarb1Q61009 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scarb1Q61009 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.79□□□□□ -0.36
Scarb1Q61009 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scarb1Q61009 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scarb1Q61009 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scarb1Q61009 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scarb1Q61009 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scarb1Q61009 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Scarb1Q61009 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scarb1Q61009 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scarb1Q61009 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scarb1Q61009 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scarb1Q61009 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scarb1Q61009 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Scarb1Q61009 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Scarb1Q61009 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Scarb1Q61009 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scarb1Q61009 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.78□□□□□ -0.36
Scarb1Q61009 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scarb1Q61009 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.78□□□□□ -0.36
Scarb1Q61009 Gm7367-201ENSMUST00000057611 492 ntBASIC12.78□□□□□ -0.36
Scarb1Q61009 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scarb1Q61009 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scarb1Q61009 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scarb1Q61009 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Scarb1Q61009 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scarb1Q61009 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Scarb1Q61009 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scarb1Q61009 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scarb1Q61009 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scarb1Q61009 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Scarb1Q61009 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scarb1Q61009 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scarb1Q61009 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scarb1Q61009 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scarb1Q61009 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Scarb1Q61009 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scarb1Q61009 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scarb1Q61009 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Scarb1Q61009 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.77□□□□□ -0.36
Scarb1Q61009 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scarb1Q61009 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scarb1Q61009 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.77□□□□□ -0.37
Scarb1Q61009 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scarb1Q61009 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Scarb1Q61009 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.77□□□□□ -0.37
Scarb1Q61009 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scarb1Q61009 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Scarb1Q61009 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Scarb1Q61009 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scarb1Q61009 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scarb1Q61009 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scarb1Q61009 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scarb1Q61009 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Scarb1Q61009 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scarb1Q61009 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.77□□□□□ -0.37
Scarb1Q61009 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.77□□□□□ -0.37
Scarb1Q61009 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.77□□□□□ -0.37
Scarb1Q61009 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.77□□□□□ -0.37
Scarb1Q61009 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms